| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 4350 | NP0828A | hla2473 | HQ1682A | VNG0560 | rrnAC3529 | Hmu0997 |
| 2273 | NP0828A | 4558 | 1665 | 1842 | 1823 | 1904 | 1929 |
| 2526 | hla2473 | 1665 | 4505 | 1991 | 2179 | 2326 | 2261 |
| 2998 | HQ1682A | 1842 | 1991 | 4682 | 2588 | 2561 | 2588 |
| 3501 | VNG0560 | 1823 | 2179 | 2588 | 4424 | 3082 | 2979 |
| 3469 | rrnAC3529 | 1904 | 2326 | 2561 | 3082 | 4433 | 3205 |
| 3502 | Hmu0997 | 1929 | 2261 | 2588 | 2979 | 3205 | 4369 |
696 symbols consensus -MSGLTVV-----------------------------------------------PPVVV #oth 2243123211111111111111111111111111111111111111111111111..413 NP0828A MNEL:S:-:::::::::::::::::::::::::::::::::::::::::::::::::T:F hla2473 VNPI::SL:::::::::::::::::::::::::::::::::::::::::::::::::Y:: HQ1682A :::::S:LIPTVVSMFTLIEMCMQLALSAFANITYTILPAAAAPSLPTIEFVIPF::AFA VNG0560 :-MID:F::::::::::::::::::::::::::::::::::::::::::::::::::F:P rrnAC3529 :::M:::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0997 ::T::AT:::::::::::::::::::::::::::::::::::::::::::::::::::F: consensus LLAAALLVPFLPRRAGHALGALATAAVVPWALLV---PTGAHLPVTFLGFDAILLNVDPF #oth 2223.2313311..31.2222313233233223311134.22342212.1111121..4. NP0828A VI::::V:::VS::IA:GVSIA:LV:::G:::::::::D:IGPTY::M:L:V:VVS::D: hla2473 :A:::F::LG::::::::AA:::::FTFAQ:V:LGDGG:::YVATQLF:::V::F:::Q: HQ1682A I:SI::IA:::S::V::V::VIV::G:AVIS:VS::::V:::::::::::::V:F:::A: VNG0560 V:V::::::::S::T::::::V:S:::::YVW:::::A:::::::KLF::H::::::::: rrnAC3529 :::L:IA:SR::::::::V:::VP:LA:::::A:::::E::::QTQ::::::V::::::: Hmu0997 :::V::::AV::::V::G::I:::G:L:::S:SI:::SA:VYHD::::::::V:::::E: consensus SRLMGIIFGLIGAAAVLYSYASDAENRQTAFALGYVGTSLGAVFAGDWLTLIFFWELMAV #oth .21.1211.421111.2111322143421221.3..221312121....1.111..1..2 NP0828A ::::A::::GF:::::AWA:FA:TD::HLLWG:A:::A::WT:TV::::G:VVG::V::I hla2473 :L:::VVV:FLAT:::::A:GTE:PKWV:::::I::SSTV:TIY:::::::::::::::: HQ1682A ::V::V:::T::::::::::S:Q:S::::::::::::::I:S:::::::::V:::::::I VNG0560 :T:::L::::::::G:V:::::::::I::::::::::::::::::::::::::::::::A rrnAC3529 :::::::::::A:V::::::::E:NTT::GY::S::A::F:::::::::::::::::::: Hmu0997 :::::L:::I:::V:::::L:::::RV::::::S::A::V:::::::::::::::::::: consensus TSTLLVWHYGGKAVRAGFRYALAHGIGGSLLLAAIIWHYAEA-------GTFLFTS---- #oth 1..21..31..2.....1...13.11..11.2111232334311121222311.422212 NP0828A A::VF::LS::A:::::Y:::I::A::::::::GVVLYLFT::::DPSATALH:DGTGIS hla2473 :::::::Q:::::::::Y::::F:::::TF::G:VVV:G:SMLGSVPAGEI:::S::::: HQ1682A :::A:::D:::E:::::::::IY::::::::I::V::::VDV::::::::S::::A:::: VNG0560 ::::::::::::::::::::::::::::T::::::::QF::T::::::::::::G:VP:G rrnAC3529 ::::::::::::::::::::::L::L::T::M:::LR::V:V:::::::E::::A:VP:G Hmu0997 ::::::::::::::::::::::L::L:::::MG::L:::SV::::::::::::::G:::: consensus G--TAGIAAGIAAALAAIGIGVNVGFIGLHAWLPDTYPRPHIAASVFLCVFTTKTGVYGM #oth 12234.23313123..12.....21111..3..........1.1....111...11..22 NP0828A :APIP:TEISL::V::GV:::::TAM::::S::::::::::V:T:::::CY:::SA::AA hla2473 -:::T::H:S-:TL:::::::::C:::F::T::::::::::V::::::S::::::A::V: HQ1682A -::AS:LT:::P:::::V::::::::V:::V:::::::::::::::::S:Y::::::::L VNG0560 :PE:::L:GS::PV:::L::::::::V::::::::::::::::::::::::::::::::L rrnAC3529 :PE::::TT:L::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0997 -::-E:::::P::I:::L::::::::V:::T::::::::::::::::::::::::::::: consensus YRAFPD-GNMAIAYMGGAMAVFGACFALLQNDMRRLLSYHIQSQVGYMVAGVGIGSALA- #oth 1.1..21.2332.12.12..22.152..2.2.1.........1...1.1..2.2112111 NP0828A :::::::::VVL:FV:A:::IY::G:::A:K:::::::::::::::I:L::I:V::::G: hla2473 :::::E::G:WL::L::F:::Y::F:::::Y:P:::::::::A:::::L::L:LAT:VGD HQ1682A A::::::::VL:::::A:::LV:VVY:::::::::::::::::::::::::I:::T:::: VNG0560 ::V::EH::::V::::::::::::MM::F::::::::::::::::::::::::::::::: rrnAC3529 :::::N::HE:::::::G::I:::L:::F::::::::::::::::::::::::::TS::: Hmu0997 ::::::::HLL::::::::::::V:Y::::::::::::::::::::::::::::::V:G: consensus --QAGAFAHVFNHILYKGLLFMTAGVVIYRTGEERLKKLGGLAREMPITAGAFLVAALSI #oth 1132.1...1..11...2....11.12121212131332.113132.212211311.2.. NP0828A ::I::::::L::::::::::::A::IL:LQLK:N::NNF:AIGTSA::ALVV:::G:M:: hla2473 FAVT:G:::L::NV:::S::::AV::::::::V:DIRDM:::W:V::V:FLVY::G:A:: HQ1682A ::T::::::::::::::A:::::::::VS:V:::N::Y::::R:YL:L::L::GI::::: VNG0560 ::::::::::::::::::::::::::IV::::::::P::::::::::::::::T:::::: rrnAC3529 ::::::::::::::::::::::::::::::::T:S:::::::W::::::::::S:::::: Hmu0997 ::VG:::::::::::::A::::::::::::::::S::::::::::::::::::S:::::: consensus SGFPGFNGFVSKGIIISAAHYDFAKEPL-GVGEF--DGLEWLLLLGGVGTFMSFIKFGYY #oth 211......1...11222112425334225313211331332122111...1....1... NP0828A ::V::::::I:::MVMD::D:::PSDVV:I::D:SI:I:F:MIAV:SM:::A:::::::: hla2473 TAV::::::I:::MV:DS::EIHNF:L:F:E:L-::--:W:::I::::::::::::L::: HQ1682A :::::::::::::M:TA::DKK------:---N:::::IFYI::AA:::::::::::::: VNG0560 ::::::::::::::::::S::MH:--::VT::::::T::QV::::::::::::::::::: rrnAC3529 A::::::::::::::::GS::T:G:G:::PL:::::YT:::M:::::::::::::::::: Hmu0997 A:::::::::::::V:::S::::K::A:VH:::Y::T:::L::::::::::::::::::: consensus AFFHG-----------EADGDVKDANRGQAVAMVAVAALCVVFGL-YDTA-LFAILPFDV #oth 1.2211111111111133243331122113221232131.241.2113411.1521.433 NP0828A ::LD::::::::::::-EPI:AP:::L:H::VAG::::A:::::V::YQ:::VPY::M-- hla2473 M:::::::::::::::S:TLSP:::T:F:T:G::LAGGA::F::TPFTYGY:VELM::TA HQ1682A ::IRSTPDSGVIAGSEN::A:IISSAI::R:::LS::T::IL::::FPD:::::L::GST VNG0560 ::::::::::::::::SY::T:::::::::A::::I::::LGY::::PEG:::G:::I:: rrnAC3529 :::::::::::::::::Y:DS:P::::::SI:::::::::IIY:V::::::::T:::::: Hmu0997 :::::::::::::::::H::E:R::::::S::::V::V::::Y::::::::::S:::V:: consensus TAAPLV-HPYSTYT--HLTEGVVLAVLGIIGFALTKRPLSKL-GRVPDVDAVYNPAAFYG #oth 2424443111312132.131232.112.332.323.31124111322.2.4222122..1 NP0828A -:GG:ELS:::LS-::::LKAGY::GG::AI:V:G:PIIDR::HGGF:::Q::D:::::: hla2473 EV::EL::::::S-::::::SAA:L:A:FV::FAL::::GW:AHHMR:::::TY:::::L HQ1682A :D:---:::FTLG-:::::::I::::::::::::V:::I:NI::K:::I:T:I::G:::L VNG0560 :TN:P:G:V:T:::MS::::::A:::::V:::V:V:A:::G:::::::::::::RVL::: rrnAC3529 :SGAV:D:V:K:::VP::I:::::::::LLC::V::K:::::::::::I:SL::::V::: Hmu0997 :::S:A::::E:::IP:VA:::::::::LV::YA::K:::::::::::L:RI::::V::: consensus ARGLVVGVTELYAAVDRAV-------VAAAAAVTGTVRHPAAVAG--GADPD-------- #oth 3.2214.2221222..22211111112523344433234.54224122344211111111 NP0828A V:S:SG:LGG::NR::GL:::::::::GTGWRLV:::HE:STAIR::::I:ESWQDAYDR hla2473 :::S:W:::::W::::::::::::::MN:I:::EW:AM::REAL:RA:V:VE:::::::: HQ1682A T::::R:T::IF:I::N:IQVIATRSLEIT:NPY:SI:Q:::ILL::QR::::::::::: VNG0560 T:A::::::::::::::V::::::::::::S:TA:V::A:D::::::RLLG::::::::: rrnAC3529 S::::::::::::::::::::::::::Q:TSV::RA:TS:ND:IA:::LRD::::::::: Hmu0997 :::V:L:TIR::G::::VA::::::::RT:TTA:AVAT::ER::ERF::NSQ:::::::: consensus ----TDGPVSLRAGIGLSILVLAVVVAVALIALL-- #oth 111124444432221121113222223222444544 NP0828A RYES:P:KTGGKL::::T:Y:A:G:LT:::AIA:FI hla2473 ::::------I:T:::R:V:F:TLAAG:::FVFVLG HQ1682A :::::LTDG::Q:T::T:V:LVV::LVI:F:GTMSM VNG0560 ::::::S::::::DYST::::V:::::AFVV:ITAL rrnAC3529 ::::DTLVHPM:::::::::I:::F:T:::L::S:: Hmu0997 ::::D::::T::::::::V::::LF:::G::L:F::