| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 1222 | hla0469 | rrnAC2335 | Hmu0022 | VNG2248 | HQ2872A | NP1836A |
| 677 | hla0469 | 2040 | 429 | 532 | 448 | 464 | 499 |
| 765 | rrnAC2335 | 429 | 1296 | 629 | 454 | 480 | 546 |
| 801 | Hmu0022 | 532 | 629 | 1239 | 504 | 569 | 554 |
| 714 | VNG2248 | 448 | 454 | 504 | 1409 | 417 | 603 |
| 701 | HQ2872A | 464 | 480 | 569 | 417 | 1231 | 595 |
| 866 | NP1836A | 499 | 546 | 554 | 603 | 595 | 1263 |
296 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 hla0469 VEEHVVVSVVSLNKSVAASVVEEINLSGRHYILTNAPFGHKDCECTVTTCGGERLFRYYT rrnAC2335 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0022 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2248 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2872A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1836A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -----------------------------------------MLRRLRENGPTVLVPLAWL #oth 1111111111111111111111111111111111111111111323.231.32.1.1..3 hla0469 DTAPICEYTEDTLVPPTVLSVPQSQLSPEGCLCSTAAIQPSVF:S::::::GL:::A::T rrnAC2335 ::::::::::::::::::::::::::::::::::::::::::FP:::AQ:::::I::::: Hmu0022 :::::::::::::::::::::::::::::::::::::::::::::::::::V:::::::T VNG2248 :::::::::::::::::::::::::::::::::::::::::::D:T::YA:VG::::::G HQ2872A :::::::::::::::::::::::::::::::::::::::::::Q:F:A:::AL::::::I NP1836A ::::::::::::::::::::::::::::::::::::::::::::TV:DA::::::::::: consensus VVAAAHLGVVSDRALLIAHVVMAVLLAAFAVLSWSEMRDGALRAWRLVLLVGLGVTLLGI #oth 222111222233211211.2.2323111.3131.31.34.1..2.241222.342.13.3 hla0469 ::::TV:::I:T:::FV:::::S:::V::VAA::RD:S::V::::K::I:A:TP:::A:V rrnAC2335 L:GL:::D::T::TV::F:::A:::I::::::::D::VT:V::I::DI:::::LL:VG:: Hmu0022 FAI::::D:LAL:TV::::L::DAV:V::T::::::::R:V::::::::::::AL::::T VNG2248 FT::::::Y:GSH::FV::::IVG::V::GAV::T::DA:::::::G:IVA:V::::::V HQ2872A ::G:::AEY::LE::T:::G::::I::G:V:::::D::S::::T:WIIVAI:FVI::S:L NP1836A ::::::R:L:::H:::V::::::AFI:G:::TG::::D::::::::A::V:::::::S:: consensus AGFL--STP---LRA-LL-VSLVGWMLLPAAGLAYTGRRVPAG--ARAYFGAAVLSVAGA #oth 31113244121113442143123..211.231132.23234241132313211331.1.2 hla0469 ::::AFGDTFGVPPDA::A:::F::A::::::F:::RS::EE:::::I:DVG:ACC:::T rrnAC2335 V:::::YS::::::VPF:TTT:L:::AV:GV::Y:::KH::::::Q:::TAG:::::L:: Hmu0022 T:L:::Q:::::PASS::WLTV:::L:V::::::::::H:DRS::PL::T:G:::::L:: VNG2248 :S:RVPAV:GGV::::--:ATV:::::::VRA::V:A::T::PGL::V:L:::MA::::G HQ2872A I:L::::::::::NRG::R:::S:::::::I:FID::::SG:V::PLTT:::::I::::T NP1836A ::::LP:E::::::::--:::I:::::::::::L:::YLFT:A::RTV::::GW:::::: consensus AVYVAGLA-P---GDGTLLLAGIALVGVGQTAGIVDAVRRYDR------------- #oth 3223214344111334433311112111...21.22.2433332321111111111 hla0469 ----V:I:LA:::PSA:WTA:AL:V::A::::::L::TL::--::::::::::::: rrnAC2335 :::-::ALF::::PAE:T:::::G:AL::::V:::Q:::QP:EPSG:::::::::: Hmu0022 I:::::TVVS:::::PLV:V::L:VA:::::::::A:::D:--::::::::::::: VNG2248 ::T:V:::A:LSAAS:W:V::::GA:::::::S:AA:AWESS:PDSFSPGSGEHAI HQ2872A VL:FISG-:-:::SEMV:IF::L::::::::I::::::I::QI::::::::::::: NP1836A V::TIS:-:C::::::P:V:V::::::A:::V:::::AM:D::EQ:::::::::::