|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 851 | NP0832A | hla2476 | HQ1679A | VNG0565 | rrnAC3532 | Hmu1000 |
483 | NP0832A | 930 | 419 | 387 | 417 | 438 | 412 |
655 | hla2476 | 419 | 1189 | 515 | 470 | 506 | 500 |
639 | HQ1679A | 387 | 515 | 874 | 504 | 543 | 558 |
616 | VNG0565 | 417 | 470 | 504 | 857 | 535 | 507 |
672 | rrnAC3532 | 438 | 506 | 543 | 535 | 870 | 647 |
644 | Hmu1000 | 412 | 500 | 558 | 507 | 647 | 860 |
164 symbols consensus -----------------------MIDLLTTRYNYIAFFLLLGIGLYMMIASRNLVKKVIG #oth 111111111111111111111223314242322.42332.32..3.2213231.1..1.. NP0832A ::::::::::::::::::::::::::--G:YHY:LTA:V:FL::I::::DN:::I::::: hla2476 MTGALDTTAGVASALASGTTAVSAL:V::::HS:V::A:::C::::::::NPH::::I:: HQ1679A :::::::::::::::::::::MTP:E:F:S::S::V:VA:V:::::GV:N:S:::::::: VNG0565 ::::::::::::::::::::::::MEA:AAKDY:::S:::I:::T:V:::AG:::::::: rrnAC3532 ::::::::::::::::::::::::FE::NSH:::F:VM:::::::::L:E:::::::::: Hmu1000 :::::::::::::::::::::::V::TFL:H:::Y:VVA:::::V::LVE:S:::::::: consensus LNIFQTGIFLFFITSAYVEGGAPPIIEEGA----PYVSPLPHVLILTAIVVGVSLTAVAL #oth 1.31.2211.2111311131231122531341122221.11..11........1...11. NP0832A ::FA:ISVY:MLV:IG:::DSN::::GF:E:::::HSN::V:::V::::::::::::L:: hla2476 ::L:::A:::L:::::::::::I:::P:::AETQTF:::::::IV:::::::::::::G: HQ1679A :::::V:::::::A:G::N:A:::L::K::E::TA:A::::::::::::::::::::::: VNG0565 M::::::::::::A:::::::T::LLTSET:::::H:::V:::::::::::::A:::::: rrnAC3532 M:::::::::::::L:FRT::N::::K::GS::::::::::::::::::::::::::::: Hmu1000 M:V:::::::::V:T::RS:AG:AVVY:::G::::::::::::::::::::::::::::: consensus ALIIRIYDEYGTLDEDVLREL--------------------SDD #oth 1121.2.421.1.1223122221111111122221122114441 NP0832A ::V::L:S:F::::AREIEAKI::::::::AASEGGDKGGD::: hla2476 ::C::::::::::RT::::::LRDEGSLPERPAVGGVDGGET:E HQ1679A :::::V:NA::S:::::I::V:::::::::::::::::::QLN: VNG0565 GM:V::::D::::::RT:K:V:::::::::::::::::::R:S: rrnAC3532 :::::::T::::::::K:KQ:::::::::::::::::::::YY: Hmu1000 :::V:::A:::::::E:::::::::::::::::::::::::DH: