| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 2676 | NP0842A | hla2481 | VNG0571 | HQ1674A | rrnAC3537 | Hmu1005 |
| 1216 | NP0842A | 2675 | 804 | 800 | 871 | 816 | 952 |
| 1533 | hla2481 | 804 | 3183 | 948 | 1002 | 1074 | 1150 |
| 1484 | VNG0571 | 800 | 948 | 2695 | 1026 | 1202 | 1143 |
| 1599 | HQ1674A | 871 | 1002 | 1026 | 2913 | 1207 | 1253 |
| 1843 | rrnAC3537 | 816 | 1074 | 1202 | 1207 | 2697 | 1536 |
| 1886 | Hmu1005 | 952 | 1150 | 1143 | 1253 | 1536 | 2424 |
443 symbols consensus ------------------------------------AAANRLLVPVADSTTLRNTVAYAV #oth 11111111111111111111111111111233344453443322124223.213.121.2 NP0842A ::::::::::::::::::::::::::::::MEDAIMSV::DV:::ISP::::KQ:IN::: hla2481 VADTDAGSDTADSEAAGGEAGDPVEAGDEPEHESPS:P:GGIVI::EPTP:::A:I:H:: VNG0571 ::::::::::::::::::::::::::::::::::::M:D:D::I:::::E:V:Q::SH:A HQ1674A :::::::::::::::::::::::::::::MAGSTAND:YS::::::R::::I:::::::I rrnAC3537 :::::::::::::::::::::::::::::::::MTVPPPR:::::::::V:V:::::::: Hmu1005 ::::::::::::::::::::::::::::::::::::-------------V:::D::S::I consensus EAAEDAAREGA--PTVHLVAVASGRAVDPDADNRAAAAEELLERVEVWA----------- #oth 24.4322341522422.1.5432414423335333341332.2.2221111111111111 NP0842A :V:NG:ESG:S::--::::LTTP:HH:GGEGL::---DK:::A:::GY:::::::::::: hla2481 :::I:---::F::S:I:::EI::W:NG::G::D::::::RV:::A:A::::::::::::: VNG0571 DR:QE--:D:T::::L:F:CPV:E:PANAADSAA::E::A::D::S:::::::::::::: HQ1674A R:::S::EKT:AN::::F:YLSRQ:GF:S:SI:NISS:D:F::::S:::TEDVNDIQSES rrnAC3537 :Q::SP::::QQQISL:::::::T:::::::QTELGQ:KD::D:ID::L::::::::::: Hmu1005 :T:G:::ET:E::A:::F:V::::::I:::GPDEL::DR:::::::A::::::::::::: consensus ------TEDLDTADGSR--VAIETDLIGADRYLFSPGDYAEVLIAYAEEHGIDRVVLDPE #oth 111111431234323331123112522.2.2.113.312224343.13213321122.12 NP0842A ::::::---AAA:E::-:::S::AK:L:T:E:FAD:E:HF:L:VR:V:::::E:::I:RS hla2481 :::::::S:::DV::E:PL:TVV:E:::::E:::G:D::VR::A::::ANDA:::L:::: VNG0571 :::::::D::G-D:A:::::::::S:V:L:V:::N:::::D:FG:::R:N:VTA:::::R HQ1674A MVESAGS:::::::ETI::IT:::T:L:T:::::::T:F::IT:N:::K:NL::IIV::: rrnAC3537 ::::::D:::G:SPP:N::LEV:LGV::::::::::::::DAIL:::D::S:E::::::: Hmu1005 ::::::Q::RSE:::--::I:V:::IV:L::::::::E:::T::E::TA::V::I::::: consensus YNPGGTAPMLRPLEVALARADITVETAPVERPTRRTRLARAATLRKGAAIFGASLAFYLL #oth 141324122.222242.4423223.4111214213342424221523344113232..23 NP0842A :SVDA::QP:QDIGA:::E:G:DY:VPAASGSW:P:----G:E:VR:SI:AVVAFG::IA hla2481 :T:VSNTTL:Q:::F::SNSSL:::::::T::::GE::RTE::GKRF::M::F::::::I VNG0571 F::L:M::L:P:::RE:EA:GL:T:L:::::A:::GPIT:S:G:GQF:LL:::AFG::Q: HQ1674A :Q:::G:::::SY:T::TQ::C:::K:::::R:S:S:IETPS::M::I:T:VICN::::: rrnAC3537 F:::::T::::::::E:V:G::E:::::::::A:S:A:::::::P:YLT:::::YL:::: Hmu1005 :D:::S:::::::Q:D:::SE:EI:E:::::Q::::V::::E::::A:VV:::::L:::V consensus LGGSLTPFDLLTGAVTALIVAVLLARVAFSRQPRLGRLPRRLGRMLLYAPYLLWEIAKAN #oth 12323332233..12..31123312212244313332344213.23212.21.2..21.. NP0842A :::PTYT:A:W::::::::A::::RN:::E:T:Q::AALATV::G::FI::M::::T::: hla2481 ::DP:YW::WV::IA::A::S:T:S::SIDVE:GIP:T:M::L:GVI:V:V::F::V::: VNG0571 IATE::TVN:I:::I::T:::GV:R::STQGSV:PR::VG:V::::V::::::::::::: HQ1674A IA::I:::N:::::::::AASIAFSNIT:TTS:::TKTGL:VL::G:FI::::::::::: rrnAC3537 :S-:YK:L:F::::I::T::TA:::PI::::::S:T:I::Q:A:FVI:V::::K:::V:: Hmu1005 ::-::SL::V:::::::G:::::::P::::E::SF:::A:Q:V::A::::F:::::T::: consensus VEIAYVVLHPSLPIDPKMVRLRAAVWGDLPVTTLANSITLTPGTLTVDVADRALTIHSLT #oth 222.211.1.1...1.4232321212233221.1.............225345131.1.2 NP0842A :QF:::::::::::::CLD:VD:::GDG:SL::F::::::::::::::SVGNE:LV:::A hla2481 I:V:R:I:D:R:::E:T:N:M:VI:GSG::LM:::::::::::::::RAR:SD:YV:::I VNG0571 :A::K:::::R:::::AV:EFD::::SE::A::::::::::::::::::TQ:HF:V:::: HQ1674A LA:::II:::::::::E:QQF::G:R:AVS:M:::::::::::::::::D:DG:Y::T:: rrnAC3537 L::::::::::::::::::E:E::I:::GA:::::::::::::::::S:SQQ:FD::::: Hmu1005 ::V:::::::::::::::::::::::::T:::::::::::::::::::::R:SF:::::: consensus PSARDDLFDGGLERAVRFVFYGRAAARIPSPAERDD-----GPDAT-----------VDS #oth 411.31.32.31..11..11...2222313.31.13222123325211111111111433 NP0842A ::::E::IN:LH::::::F::::KGLEL:G::A:G:VEPLIR:SE::::::::::::KAE hla2481 :::::G::::S:::WT:::Y::::S::L:T:R::::CAILQ:::::EEMPIAAADGGA:P VNG0571 AD::R::LA::::::::::::::::M:SAT:S::GE:::::T::GS:::::::::::::: HQ1674A E:::S::SA::::::::::::::::::F:A:T:::S:::::ILSI::::::::::::TE: rrnAC3537 G:S:E::::::::::::::::::E::A::::R::GQ::::::D:N:::::::::::::E: Hmu1005 Q:::::::::V:::::::::::::::::A:::::::::::::----:::::::::::--- consensus AIGDGSPDVADDDD--------- #oth 34333333253143433233222 NP0842A ::T::GT:EGG:A:D:::::::: hla2481 DT:N:::AEP::E:REETEVTDE VNG0571 :GI:SAQSASRT:TNAGDSE::: HQ1674A ES:EL:T::IS:PSSSQTPQEAD rrnAC3537 D:::--:E:::::-::::::::: Hmu1005 -------E:V::--:::::::::