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6 genomes BUD1627 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2373

-

Hbo3042

Hmu0111

-

hla1962

NP0472A

HQ2378A

Pairwise sequence scores
Consensus score819 rrnAC2373 Hmu0111 hla1962 Hbo3042 HQ2378A NP0472A
633rrnAC2373 820 633 528 498 425 504
613Hmu0111 633 819 485 488 459 488
606hla1962 528 485 1122 515 402 535
594Hbo3042 498 488 515 820 514 574
544HQ2378A 425 459 402 514 797 550
677NP0472A 504 488 535 574 550 808

147 symbols
consensus       ---------------------------------------MSEIDADALLPNDHVQQAAAD
#oth            111111111111111111111111111111111111111.231.2221...11.121132
rrnAC2373       ::::::::::::::::::::::::::::::::::::::::AQ:::GEI::::::::M::E
Hmu0111         :::::::::::::::::::::::::::::::::::::::::::::GEI:::E::::M:::
hla1962         VDRHERPFRDSQNVRRVSTFQVPPAVGRAYKPIRAQQTD::AN:PAD:::::R:K:::L:
Hbo3042         :::::::::::::::::::::::::::::::::::::::::N::::D::::ER::::VVN
HQ2378A         ::::::::::::::::::::::::::::::::::::::::T:::S::::::E::KN:VR:
NP0472A         ::::::::::::::::::::::::::::::::::::::::A:::::::::::::KT:VL:

consensus       GDITQLHRGA-NRYAEEGDTFEIDGTTFEVTDVTERTLGDLTDEDARREGSESLEAYKER
#oth            .21..12..1213.121..1.321143.2213.21.....2..2..2....21.3..13.
rrnAC2373       :RV::M:::-:HQ::D::::::::::E:::::::H:::::M:::::Q:::::D:A:::N:
Hmu0111         :TV::M:::-:HA::S:::::V:::QR:::::::H::::::::::::::::DD:::::R:
hla1962         ::V::::::-::::G::::A::V::V:::L:E::::::::M:::::K::::P::::::::
Hbo3042         ::::::T:::S::::::::A:D:::E::TI:S:EH:::::F:::::K:::::::D:::Q:
HQ2378A         ::::::S:::I:K::S:::::S::EDV:VISS:D:::::::::L::Q:::::::T::R::
NP0472A         ::::::S:::S:::::A:::::LE:::::::A:E:::::::::D:::::::P:::::R::

consensus       MQRVHPGGFEWDDDSDVLRHRFEPAE-
#oth            1322.313.1..232211111.22232
rrnAC2373       :KK::-:S:::::::E:V::::A::DE
Hmu0111         LE:::-DE::::PE:::V::::::V:D
hla1962         :VHA:G:S:D::::A::V::::RR:::
Hbo3042         :K:::::D::::ES:E::TY:::RQH:
HQ2378A         :::I:TD:::::PTNKI:TYQ::S:-:
NP0472A         :::A:::::::::E::I:TY:::::-: