|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 2664 | HQ2456A | hla1100 | HVO_2918 | Hbo2699 | Hmu0857 | NP2924A |
1991 | HQ2456A | 2655 | 1691 | 1869 | 1876 | 1918 | 1807 |
2099 | hla1100 | 1691 | 2700 | 1952 | 2006 | 1998 | 2050 |
2287 | HVO_2918 | 1869 | 1952 | 2630 | 2242 | 2055 | 2037 |
2339 | Hbo2699 | 1876 | 2006 | 2242 | 2648 | 2060 | 2047 |
2340 | Hmu0857 | 1918 | 1998 | 2055 | 2060 | 2673 | 2116 |
2270 | NP2924A | 1807 | 2050 | 2037 | 2047 | 2116 | 2735 |
344 symbols consensus MQQYLDLVTDVLRGGTHKPNRTGVDTIASFSQHYEVDLQEGFPLLTTKDLSGFRWNSLIH #oth .2..2...221.33.31.........113..41.111.42........211.2..1..11 HQ2456A :H::R::::A:::S:E:::::::::::S::::::TIN:RD::::::::::::S::H::LS hla1100 ::::::::D:T:ST::Y:::::::::::T::GQ:T:::S:::::::::KMD:Y::::::: HVO_2918 :R::::::::::GT:R:::::::::::SG::K::T::::::::::::::::::::::::: Hbo2699 :R::::::::::SN:Q:::::::::::SA::R:::::::::::::::::::::::::::: Hmu0857 ::::::::DST:::::Y:::::::::V:::::::::::A::::::::::::::::::::: NP2924A ::::H:::S:::A::::::::::::::::::H::::::GA::::::::RMD:Y::::::: consensus ELLWYLSGEEHIRTLREETGIWDAWADDEGRLDTAYGRFWRRFPVPDEDARLPGEAWPDD #oth .21..........3.....2.......11.1.1.........1.1.23333.1..2..3. HQ2456A :FV::::::::::S:::::S::::::::D:::E:::::::::Y:::ST:SQ:::::::V: hla1100 :V:::::::::::D:::::K:::::::::::::::::::::::::::GVDA::::T::K: HVO_2918 :::::::::::::::::::::::::::E::H:::::::::::Y:::E:--G:A::::::: Hbo2699 :FV::::::::::::::::::::::::E::::::::::::::::::::--G:::::::E: Hmu0857 :::::::::::::E:::::::::::::E::H:::::::::::Y:I::D:::::::S:::: NP2924A :::::::::::::::::::K::::::::::H:::::::::::::::::P::::::S:::: consensus AHRWMNDEGT--------FDQLAYVLDTLDENPRSRRLVVNAWHPANAAVSTLPPCHYTF #oth 4...31212112121122...11.1111.3...3...2.11.......11........1. HQ2456A D:::R::D::::::::::::::::AIEQ:Q:::Q:::I:IS::::::::I:::::::::: hla1100 ::::VTV:EGPEGVERRT:::IQ::::::::::::::M:::::::::::::::::::::: HVO_2918 G::::::::::::::::::::::::::::::::N:::::I:::::::::::::::::::: Hbo2699 T::::::::::::::::::::IQ::::::R:::N:::M::::::::::::::::::::S: Hmu0857 ::::V::D:::::::::::::::::I:Q:E::::::::::::::::::T::::::::::: NP2924A S:::TTT:T:PDGTERQV:::::::::::E:::H:::::::::::::::::::::::::: consensus VFNVQGDRLNLHLTQRSGDIALGVPFNIAAYALLAQAVAQRTGFELGSFAHTIVDAHIYC #oth .1...223..1............1...2...11..312.1113113.3.1.11....1.. HQ2456A :::::NN:::V::::::::::::::::::::S:::TVI::Q:ELTP:T:::S:::::::: hla1100 :V:::DG::::::::::::::::::::::::::::N:L:::::::I:E:G::V::::::: HVO_2918 :::::::E:::::::::::::::::::L::::I:::V::::A:::::::::::::::V:: Hbo2699 :::::::K:::::::::::::::I:::::::::::T:::::::::V:K::::V::::V:: Hmu0857 ::::::G:::V::::::::::::::::V:::S::::::::::D::::::::::::::V:: NP2924A :::::::Q::V::::::::::::::::L:::S:::H:::N::A::V:::G:::::::::: consensus GAGDRGAWYAD--NLDALQDRLADVDSRDEYLDVREWLEEAAPAEADGEEGYDHVPGLLE #oth .3.2..2..12113.35114..33133231.21.12.1233..3.2223221..1....3 HQ2456A :M:::::::GEGET::S:RN::EA::NPS::R:::S::L:S::S:PANQS::::I::::: hla1100 :R::::Q:::N::::RYV:::::T:E:KAD::::KS:V:RT::D::::::R::::::::: HVO_2918 :::E:::::G:::H::E::S:::::Q:P::::::::::LD:::E::::::D::::::::L Hbo2699 :E:::::::G:::H:SD::T:::::S:::::::::D::V:::::::E:K:R::::::::K Hmu0857 :::A::E:::::::::G::E::QH::AKED:RA::::::ST::::D::H::::::::::: NP2924A :::::::::::::K:P::::::N:I:D:E::V:::::::SE::::::D:G:L:::::::T consensus QCAREPRDRPTIEIADVPLDDLTYDDIELHDYDPAPGIRFAVAE #oth .21.1.131.43211.31.111321123131..1121.1.1... HQ2456A ::::S::SK:QVA:D::S:::IGVEN:H:SG:::::A::::::: hla1100 :LS::::E::R:::::K:::E:::E:::VV:::S:D::S::::: HVO_2918 :AS::::E::ALDV:::::E::SFE::V:R:::::D:::::::: Hbo2699 ::::::G:::::DV::::::E:::::::::::::DE:::::::: Hmu0857 :::::::K:::M::::T:::::::::F:::G:::::::S:S::: NP2924A :LS:S:::::E::V::R:::::E:::VQ::::::::::S:S:::