5 genomes BUD1649 6 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1095 rrnAC2541 rrnB0015 HVO_B0192 - Hmu2813 Hut1920 - - -

Pairwise sequence scores
Consensus score	740	Hmu2813	rrnB0015	Hut1920	VNG1095	rrnAC2541	HVO_B0192
426	Hmu2813	827	313	278	198	261	273
425	rrnB0015	313	797	233	225	246	257
394	Hut1920	278	233	747	227	307	289
330	VNG1095	198	225	227	456	232	222
474	rrnAC2541	261	246	307	232	764	545
493	HVO_B0192	273	257	289	222	545	759

115 symbols
consensus       ------MAAAEAVVELLAGALALGSALVGLYIGYQAYRGFRRHDSPSMRYLSVGLILLTA
#oth            12112235555534434353424212321322132222232123222.11.12.121.12
Hmu2813         MNVFSALTDFTG::G:A:::A:T::::::::::G:::::L::N:D:::::::I:M:::FG
rrnB0015        :MVFETNLYGFR:I::I:SGF:S:::A::::::FRSLQS:Y::GD::::::A:::L::::
Hut1920         :::::::IG:VDP::VTRISIP:A::VL::L:::::::::::N:::::::::I::::::T
VNG1095         ::::::-----------------------------------------:Q:::::::::::
rrnAC2541       :::::::V:I:TLMNW:IT:::F::TVL:G:V:::::::Y:::N:RT:Q::::::FC:::
HVO_B0192       ::::::::TLS::LDW:IVS:::::T:::S:V:::::::Y:::::RT::A::A::F::::

consensus       VTFTVAFVGSGLLRQRILSLQLQQPLTLVTRLLQFAGLVCIAYSLH-----RRE-
#oth            12232123.331.22332344313222123122..4.122.1.1.2111111132
Hmu2813         ::YVL:LA:Q:::TF::V:IRY:NVFR:IV:::::G::LL:::::RIATDA:T:N
rrnB0015        I:Y::T::::I::QF:::::PQ:DYFLT:SNI:::::::::::A:::::::::D:
Hut1920         :S:SL:AF:GLF::LEL:PAS:ET:IR::A:IS::T::AF:T:::Y:::::::P:
VNG1095         ::N:A::::T::::LDVINGG:::::::TV:::::::::::::::Y:::::::PS
rrnAC2541       :A:V:::T::V::::GL::S:F:::::::::AF::V:VLF:::::::::::S:::
HVO_B0192       :A:G::::::V::::GYIG::Y::::::::::F::C:V:L:::::::::::S:G: