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[C] (AppB) COG1294 Cytochrome bd-type quinol oxidase, subunit 2
5 genomes BUD1653 8 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi

VNG5057

VNG5240

VNG6055

VNG6471

 -

HVO_0461

Hbo1048

Hmu1977

Hut2111

 - - -

Pairwise sequence scores
Consensus score2455 HVO_0461 Hbo1048 Hmu1977 VNG5057 VNG5240 VNG6055 VNG6471 Hut2111
1070HVO_0461 2483 1749 1040 1059 1059 1059 1059 1020
1112Hbo1048 1749 2580 1074 1101 1101 1101 1101 1067
1446Hmu1977 1040 1074 2455 1435 1435 1435 1435 1463
2444VNG5057 1059 1101 1435 2452 2452 2452 2452 1912
2444VNG5240 1059 1101 1435 2452 2452 2452 2452 1912
2444VNG6055 1059 1101 1435 2452 2452 2452 2452 1912
2444VNG6471 1059 1101 1435 2452 2452 2452 2452 1912
1923Hut2111 1020 1067 1463 1912 1912 1912 1912 2494 

353 symbols
consensus       MTDPL-------------IPVDTYLVDSLPEVWFGAVVFALGMYIVLDGFDFGIGMLYAT
#oth            ..32231111111111112121211111.113..1212.2.11122...1...1.111..
HVO_0461        :::YGA::::::::::::FAT:PLFGLP:Q:L:::L:F:I:::FLF:::::::V:AIF::
Hbo1048         ::AL:SAASGTVTLQTYGLADGPLFGLP:::M::AL:F:I::TFLF:::::::V:AIF::
Hmu1977         ::EL-:::::::::::::L:::R:::::::TI:::V:::S:A::VA:::L::::::::::
VNG5057         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5240         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6055         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6471         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut2111         ::N::L::::::::::::L::::::::::::I:::VIM:::A::::::::::::::::::

consensus       RTDEHERETLLAAFGPVWDANEVWIVAFGTMLLAAFPRVYSRLLADNYLLALGFVVALVF
#oth            .3.121..11.1.1..2..1....111..12.1....31.11.1121..12211131.23
HVO_0461        :D:DE::::::::I::F::G::::L:V::GA:F::::A::AN:FSRH:::MFAILG::IL
Hbo1048         :E::D:::Q::S:I::F::G::::L:V::GA:F::::A::AN:FSR::::MFAILG::IM
Hmu1977         :-:::::::::S::::I:::::::L:::::T::::::PI:A:::SGH:::SIAI:MG:LV
VNG5057         :::::::::F::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5240         :::::::::F::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6055         :::::::::F::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6471         :::::::::F::::::::::::::::::::::::::::::::::::::::::::::::::
Hut2111         :E:D:D::::::::::I:::::::LI:::::::::::D:::::::::::I:::::L::L:

consensus       RGLGPELREQREDERWKRYTDYAFVGGSVFAPLLLGMLAGRWLFAGATL-S-PVVLTGVG
#oth            ..11..11..12.13.2132122..3..231.111.11113.312342121213211.11
HVO_0461        :::A::MY:::H::A:QTWWGR:::V:::S::FF::VF:AH::LGVES:L:L:G:VV:LA
Hbo1048         :::A::MY:::H::S:Q:WWGR:::A:::L::FF::VF:AN:FLGAT::V:LASIVV::A
Hmu1977         ::VA::::::HD:PD:R:RC:WL::F::TVT:::::V:V:S:A:GTP::::A:GL:::::
VNG5057         ::::::::::::::::::::::::::::::::::::::::::::::::::-:::::::::
VNG5240         ::::::::::::::::::::::::::::::::::::::::::::::::::-:::::::::
VNG6055         ::::::::::::::::::::::::::::::::::::::::::::::::::-:::::::::
VNG6471         ::::::::::::::::::::::::::::::::::::::::::::::::::-:::::::::
Hut2111         ::V:::::::::::S:Q:AC:WS:::::AL::F:F:V:::S:V:SVGAV::L:AI:::::

consensus       LVAVSIVTGAAFLAAKTDSGLASELRSYGVGATVAYLGGVVVLLGTVVATDAGGAASAVL
#oth            1..12212.11.112..322.2323221.34.221..21..1211223222132422421
HVO_0461        V::LTV:A:VG:::M::RGS:QRDVAD::PR:MA:::AL:::T::YLI:VRPD--LGVLA
Hbo1048         V::LTV:S:::::GL::RGS:RD:TVR::PP:L:::::L:::AV:YLLL:RPA-MRADL:
Hmu1977         :::LCVTS::::V::::SGS::DAMVR::TT::LV::V:::A::AVAALANPSNVRALL:
VNG5057         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5240         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6055         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6471         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut2111         :::::A:::::::::::GPA::G:M:DL:IL::::::A::::::AV:IV:::::T:GTI:

consensus       SLPVAAVVALSIVAGLGGSVLARRGRYRAWLASALALPTLLTLLVAVLLYPTVYPPTG--
#oth            22.4213.3212221311322212221221122132.322123...3.11.422.21111
HVO_0461        PI:-L:L:VV:LA:AA:YLLAL:G:::TLAFGAVPV:VFAFVA:::T:MF:LAD:A::::
Hbo1048         AA:SLGL:G::V:L:VAYV:TM::EQ:VPA::A:AG:TYG:VT:::T::::FAD:GS:::
Hmu1977         :A:ALGA:LATVSFAGA:LAA::L::H:L:FGT:FG:SFA:VG:::A::::R:H:AS:::
VNG5057         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5240         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6055         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6471         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut2111         :I:GI:I:G::V::::::I:::L:DS:::::V:::::::::SA:::L::::AI::A:ASG

consensus       --LLVREAVVSPLALNLVTVLGFPVLLLVLWYFKFLYGVFSGPIE-GEGYGG-
#oth            11.1.43.11.2.1..121111212.31.12..22..11.2..1121121321
HVO_0461        :::T:AD:II:V:P::IMS:ASALL:P::FT::GI::ST::::::T::S:S-:
Hbo1048         :::T:ST:I::T:P:::MSIASALL:P::FS::VV::ST:R::V:S::S:A:E
Hmu1977         :::T:DA::::::::::T::::L:A:A:::::::::::T:A::VD::ANA--:
VNG5057         :::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5240         :::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6055         :::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6471         :::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut2111         AE:T:ET::::::::::T::::::::VV::::::::::::::::::A::::A: