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[C] (CydA) COG1271 Cytochrome bd-type quinol oxidase, subunit 1
5 genomes BUD1654 8 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG5055

VNG5242

VNG6053

VNG6473

-

HVO_0462

Hbo1047

Hmu1978

Hut2110

- - -

Pairwise sequence scores
Consensus score3668 HVO_0462 Hbo1047 Hmu1978 Hut2110 VNG5055 VNG5242 VNG6053 VNG6473
2083HVO_0462 3637 2988 1970 1965 2069 2069 2069 2069
1988Hbo1047 2988 3624 1954 1836 1974 1974 1974 1974
2863Hmu1978 1970 1954 3604 2663 2849 2849 2849 2849
2943Hut2110 1965 1836 2663 3741 2929 2929 2929 2929
3654VNG5055 2069 1974 2849 2929 3672 3672 3672 3672
3654VNG5242 2069 1974 2849 2929 3672 3672 3672 3672
3654VNG6053 2069 1974 2849 2929 3672 3672 3672 3672
3654VNG6473 2069 1974 2849 2929 3672 3672 3672 3672

499 symbols
consensus       MVPATLLSTVDLGWMALLS-------PEIASRMQFGWTISVHIIFASLSIGLAPFIIYFT
#oth            12121223333212211111111111111...2..11.12...1.121.1....111...
HVO_0462        ----------------M:D::::::::V::::L::AL:TI:::::PVM:M:::::L::::
Hbo1047         ----------------MID::::::::V::::L::AL:TI:::::PVM:M:::::LV:::
Hmu1978         -----::AENNI----::::::::::::F:::V::::::T:::L::A:::::::Y:V:::
Hut2110         :Q:P:HFLDGA::AA:M:DGTVLFLPA:F:::V::::::::::L::A:::::::::::::
VNG5055         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5242         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6053         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6473         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       WKDVRTNEQRYARLRSFWVKVFAVGFVMGTVTGIPMSFQFGTNFPQFATIAGELIGGPLA
#oth            .111.12222.11..2..311...1..1......111.1.....13.1232...1.....
HVO_0462        :::I::DDPV:EQ::R::T:I:::S::V::::::VLE:E:::::AA:S:A::::F:::::
Hbo1047         :REI:SDDPV:EQ::R::T:I:::S::V::::::VLE:E:::::AA:S:VT:::F:::::
Hmu1978         :::::SDDPA:::::E::IN:::::::::::::::::::::::::R::EVS:::::::::
Hut2110         :::I::GSE:::::::::L::::::::::::::::::::::::::G:SAL::::::::::
VNG5055         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5242         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6053         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6473         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       FEAKMAFFLEAVFLGVLLFGRERVADRTYVLSSVLVGVGAWLSGFWILVVNAWMQTPRGY
#oth            1.11...1...1...1111..11.1.11.21.1111.2.1...11....1.1.....1.1
HVO_0462        T:GM:::M:::T::::FV::::K:S:AL:MV:A:A::L:T:::AV::::A:S::::::::
Hbo1047         T:GM:::M:::T::::FV::::K:S:AL:MV:A:A::L:T:::AV::::A:S:::::::F
Hmu1978         :::::::::::::::I:::::D::S::::::::I:T:::::::::::::::::::::::F
Hut2110         ::::::::::::::::::::::K:S::::F:::::T:F:::::::::::::::::::Q::
VNG5055         ::::::::::::::::::Y:::::::::::::::::::::::::::::::::::::::::
VNG5242         ::::::::::::::::::Y:::::::::::::::::::::::::::::::::::::::::
VNG6053         ::::::::::::::::::Y:::::::::::::::::::::::::::::::::::::::::
VNG6473         ::::::::::::::::::Y:::::::::::::::::::::::::::::::::::::::::

consensus       EMVTRNGMEVAKLTDPVAAFLTPRMPWMYVHMMNASVISVALLVAGVAAYLVW-------
#oth            .12121.12112.1..1..121..11..1...2..1.11.1.21..11..3.11122222
HVO_0462        :LARES:QL:VS:V::I::YAN::F:::F:::Q::A:L::::FM::::::H::QRGISAD
Hbo1047         ::::K::QSIVS:V::I::YAN::F:::F:::Q::A:L::::FM::I:::H:F:RHYHWE
Hmu1978         :L:R:::::I:R::::::::F:::::::::::::::::A:T:V:::I:::F:::::::::
Hut2110         ::I:::::::::::::I:::F::::T::::::I:::::::::::::::::I:::::::::
VNG5055         :::::::::::::::::::::::::::::::::::::::::::::::S::::::::::::
VNG5242         :::::::::::::::::::::::::::::::::::::::::::::::S::::::::::::
VNG6053         :::::::::::::::::::::::::::::::::::::::::::::::S::::::::::::
VNG6473         :::::::::::::::::::::::::::::::::::::::::::::::S::::::::::::

consensus       -KKPDADAWNSALKLAVVLLLVSAPFQAVHGDAYGRHVEDTQPQKFAAMEAHYETGS-AD
#oth            23231241.321.12.211.222..1.12.....1...21...........11..22111
HVO_0462        DDRE::RF:RKT::I:L:V:::T:::::I:::::::::YE:::::::::::VW::D:YVP
Hbo1047         YPVQNVAF:EKT::I:I:V:VLT::::VL:::::A:::A::::::::::::VW::E:YVP
Hmu1978         :R:R:SE:::T::RM:::V::IT::L::L:::::::::A:::::::::::::::::Q:::
Hut2110         :::R::K::HT:::I::L::I:A::L::::::::::::::::::::::::::::::T:::
VNG5055         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5242         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6053         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6473         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       LHLLAFPKSLDALTDPRTENLFTVSLPGIGSFLASGGDFDAEVIGLNEYE-ENPPVALVF
#oth            1112.2.21112111.1221.12111.131.1.1....13.213..2.11111...11..
HVO_0462        EYIF:I:T:::GI::::AKE::GIGI::GA:W::::::PQ::IT::::FDT:A::::I::
Hbo1047         EYII:V:TN:ED:::::AKE:LG:GI::GA:W:V::::PT:TIT::::F:T:A::::I::
Hmu1978         :::I:I:R::::::::::D::::I::::L::::::::::S:::V::H::D::::::::::
Hut2110         :::F:I:T:P::IMN:SE::::AI:::RV::::::::::::V:K::D::::Q::::P:::
VNG5055         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5242         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6053         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6473         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       WSFRFMVGLGFLFIGLALWGGYLTYRGRLTESTRYLKSMIAASPLGYAALLTGWYVTEIG
#oth            ....2..11..1.12..1.111132212.3113111112231.11.13.111..1...1.
HVO_0462        ::::L::AA::W::L::F:A::RWWADE:Y:DDLLH:AFVGS:L::IF:VEV::I:::V:
Hbo1047         ::::L::::::W::V::F:AA:RWW::E:R:DDLLH::LMVS:L::IL:VEV::I:::V:
Hmu1978         ::::L::::::::V:::::::TRLRK:C:SD:G:::RA:MLS:::::V::::::::::::
Hut2110         ::::I::::::::::::F:::::I::D::SD:SL::RA::::::::::::::::::::::
VNG5055         ::::::::::::::::::::::::::::::::::::::::::::F:::::::::::::::
VNG5242         ::::::::::::::::::::::::::::::::::::::::::::F:::::::::::::::
VNG6053         ::::::::::::::::::::::::::::::::::::::::::::F:::::::::::::::
VNG6473         ::::::::::::::::::::::::::::::::::::::::::::F:::::::::::::::

consensus       RQPWVIQGELKTSEAVSSTLTGTEATLTLVGFVVLYIALILTALYVLKWLIRGELRSLGV
#oth            .....1.1111.211..22.1211..21.11.112.21.23222112211.131133222
HVO_0462        ::::::::V:R:::G::PG::SF:::::::::A:V:TG:LALYT::IRRI::EGPP:--:
Hbo1047         :::::V::VM::ADG::PG:S:FD::V:::::A:V:LG:LTLYG::VARI::AGPPTMA-
Hmu1978         :::::V:DV::::D:::RS::A::::G::AA::L::L::LAAFGA::::::E:::ERM::
Hut2110         :::::V::::::G:::::::SS:::::S:AA:::I::G:VVA:::T:R:::ED::DE::A
VNG5055         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5242         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6053         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6473         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       QESSAGRWRGPLPWVTSDD
#oth            42232233332312121..
HVO_0462        D:TE::AEAAAPAG::G::
Hbo1047         -::EQMTLDDATASAAG::
Hmu1978         R-TVDDTS:PR::::SG::
Hut2110         EPAPDDH:Y::I:G:::::
VNG5055         :::::::::::::::::::
VNG5242         :::::::::::::::::::
VNG6053         :::::::::::::::::::
VNG6473         :::::::::::::::::::