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5 genomes BUD1659 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1924

HVO_2985

Hbo1536

Hmu2171

Hut0237

- - -

Pairwise sequence scores
Consensus score1927 HVO_2985 Hbo1536 Hut0237 rrnAC1924 Hmu2171
797HVO_2985 1768 682 421 343 420
908Hbo1536 682 2005 396 486 432
986Hut0237 421 396 1896 554 563
1031rrnAC1924 343 486 554 1960 799
1100Hmu2171 420 432 563 799 2156

296 symbols
consensus       MRQLRSCYFCGGALDAALEEYEVLPASLRPTDDNQRRVVLCPECREKLATVVDPLLEAA-
#oth            .32.21.1...3121233231212.33.4.3324.22.1..34.221.221122223122
HVO_2985        ::E::T:D:::TD---:VGVF::::PA:T:A::-:::::::EH:E:T:SE:IA:::SRL:
Hbo1536         :::::::D::::D---:AGI::::::E:S::ESE:::::::DG:L:T:E::I::::NRLR
Hut0237         :DR:A::::::V:V::P::::P:V:RD:::SVE::QT::::::::R::S:I::SVAA:::
rrnAC1924       :N::S::::::::::VS:S::PII:K::D:EAEK:GT::::ST:::::::I:E:AV:::K
Hmu2171         :E::S::::::A::::QI:P:Q:V::::E::::Q::A:S:::S::Q:::H::ETVV::S:

consensus       -D----AVAADD--ARATDPDGTLLASESPEAGGSESDDAAAD-EQTTDAPADT-----D
#oth            12333343432311444321332233322123213333243313323133234.111113
HVO_2985        :-::::G:D::V::DV:D:ARAETG::AT::RTT:G:GGE::SVDVNAVD::P::::::P
Hbo1536         AGESGQS:EK:TQRE:SSS:NP:PAST::G:H::V:GSGQSP:TSA:AQT::E:LVGEDS
Hut0237         :-::::------::---::::Q:T::GN::D:VT:::A:::E:I::P:E:IES:::::::
rrnAC1924       A:ARET:ET:G::::GT:E:P:L:DE::T:TT::RTT:EPTTS::::::E:TT:::::::
Hmu2171         ::DGDATA:M::::VSDL:::::::DD:PGT:T:--V::SV:::G:S:::SN:::::::K

consensus       PEPAD-------ADDGSQPDDEPADGAAQGTPSDDAETADAVASGDDTRRAAEDRTDREG
#oth            232212212133433234341232333423223333323223333323342233322234
HVO_2985        ::::::::::::-------H:S:DE:DDA:S:G:::NDN:G:DDEAEVETE::A::ET:-
Hbo1536         STTT:HSAAEAEPVSDK::V::E::D:TED:::AAV::S::S::::::AG::DEGEQ::S
Hut0237         DR::::::::SSLIE:FGH::::SLIEVE:::E::EP::GD:L:NE:Q:EETP:AD:SK:
rrnAC1924       SVVEP::::::::::::LLG:DS:SA:G:EQSAQS::::::A:ES:S:NV::A:T:::QM
Hmu2171         :::EPEPAHEGRS::::E:SQSD:::Q::R:G:RHSHNGTGDEQ:V:R::DG:T::::AP

consensus       AE-------------------DAADTAEADDTPREDAADDADAADDEPP--LT-LEYNKV
#oth            43321211111111111111124233412121333342324244222.21122323111.
HVO_2985        --:::::::::::::::::::NEPSASA::EQ::P:GESGRG---E:::::--:-KFR::
Hbo1536         RA::::::::::::::::::::DET:N:T:E::T:TKET::EP:ES:::::--:-NFR::
Hut0237         GDA:::::::::::::::::::T:::V:S:::DD:::::TG::TEET:AQDFDRSS::R:
rrnAC1924       ::PTASS::::::::::::::GS:AKT:SG::E:GSDS::N:SS::G:S::::K::::::
Hmu2171         D:RRAESSERRDGAGPRRDGRG:::D::::R:QQTHS:G:TGED::G:S::::A::::::

consensus       MRLLQNREFPVERAEIADIASGAYDIDDREFDAIIDAAIDRGLIDDDNGQLRRPD-
#oth            2.1.1..11.1112.2432.32..112331221.111112.111332211.12322
HVO_2985        I:I::::::::::::VEAL::::::L::D:VAD:F:Y::E:::LV::S:T::::-:
Hbo1536         ::::N::::::::T:F::L::::::L:PSQV:D::EY::H:DVLA::G:::::A-:
Hut0237         V::::::D::L:IE::TT::GS::E:ER::TE:::::LV:::V::R:GS:::::ED
rrnAC1924       ::::::::M::D::::REV:VN:::::GEQ::::::::V:::::GQA::::VES:G
Hmu2171         ::::::::::::::::H:::TS::E:S::::::::::::E:::::EE::T:VSG::