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5 genomes BUD1665 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1296

HVO_1675

Hbo3162

Hmu1685

Hut0739

- - -

Pairwise sequence scores
Consensus score2435 Hbo3162 HVO_1675 Hut0739 rrnAC1296 Hmu1685
1772Hbo3162 2500 1669 1521 1010 1455
1865HVO_1675 1669 2496 1417 1047 1550
1834Hut0739 1521 1417 2426 1099 1600
1313rrnAC1296 1010 1047 1099 1555 1190
1933Hmu1685 1455 1550 1600 1190 2468

334 symbols
consensus       VIDALVYDDDGVEAYE-----DLAAARDADGTTWVRA--ATDAEIDAIAEAFAIHALAVE
#oth            112131233313242311122324111213111122233323213132233142141431
Hbo3162         ::S:Q:::AG:::TVSVESAS::E:::::H::::::VSA::PE:::T:SRV:S::T:EL:
HVO_1675        ::S::::R:::AS::::::ETA:D:::::::::::::::T:GE:F:RV::::G::S:S::
Hut0739         ::::::::GT:::SV:::::::I::::A:::::::HVED:S::::::V:D::DL::::I:
rrnAC1296       ----------------:::::----------------::---------------------
Hmu1685         ::::F:FG:::ISR:D:::::E:S:::::E::::IH:PEV::::L:::::T::::P:T::

consensus       DVRNDVRAKTEEFDEHTFVLVKTATLRRGETTFEEEVQTRPVGLFIGDDWLVTLTRGE--
#oth            131232121212243211212232313311221311332312122313112122343311
Hbo3162         :I:S:::P:::::HD:::::::S:S::::::::D:::::::::M:::Q::V::::VE:TA
HVO_1675        :::::A:P::::Y::Y:::::RM::::A::QV::::::::::::CF::::::::::R:::
Hut0739         ::::N::::A:::SA:::A:::::R:T:::::::::IDDE:::::::::::::VAT:S::
rrnAC1296       ----------------------------------------------------------::
Hmu1685         :L::G::::::T:P:Y::::L::I::AG:::::A::LS:T:I:::V:H::V:SVSP:A::

consensus       ADAVARVWNAVEREDERLLRRGPDFTAYRVIDVIVDDYFDLLDEIEDDIEAIEDEVIESP
#oth            4422421341121212.2.43.1.111..11112..3..22.122124..3..1214211
Hbo3162         VT::E:::QS::NREG:I:VN::::V:::IL:RV:::::::::::::T::V:::G:L:G:
HVO_1675        LEPINY::::I:::EP:M::F:::YVG:::::R:::E::G::::VGGE::L:::SIF:G:
Hut0739         ::P::::QES:R:G:::::E::::::::::L::L::S::EI:EHL:GQ::::::::V:::
rrnAC1296       -------MD::G:G:::::H::::::::::::::::A:::::::::T:::Q::E::TT:T
Hmu1685         GS::D::RH::::::::::QH:A::::::::E:V:::::EV::RV::L:::::::::D::

consensus       DPETLERINAVRRDLLSFRKQVWPAREAVGVLARGDPAQVQPQTEKYYRDVYDHLVQLVD
#oth            .313.221.3...1......21..2..122......2431113.1..1.......1111.
Hbo3162         ::DI:DGL:T::::::::::V:::T::::S::::::A:H:RES::::::::::::IEI::
HVO_1675        :::V::GL::::::::::::T:::T::::::::::::DY:REA:::::::::::::E:::
Hut0739         :ADL:GE::S:::E::::::V:::V::TLA::::::VRGI::D:Q:::::::::::::::
rrnAC1296       :I:::::::D::::::::::::::::::I::::::::K:I:::::::F:::::::::I::
Hmu1685         :R:::::::::::::::::::I:::::::::::::::P:::::::::F::::::::::A:

consensus       LTETYRDLVRGARDIYLNALSQSTNEVMKTLTVVATIFIPLTFVVGVYGMNF--SASPYN
#oth            .1....1.12.2......11........13.......11...1.1.1.....1132112.
Hbo3162         ::::::E:A::S::::::::::::::::RR::::::::::::::::I::::::::DGAW:
HVO_1675        ::::::::A:::::::::T::::::::::::::::::IL:::L:::I:::::DPG::AF:
Hut0739         :L:::::::V:T:::::::::::::::::V::::::::::::::A::::::::::GG:::
rrnAC1296       :::::::::S::::::::TV:::::::::M::::::::::::::::::::::::TD::::
Hmu1685         :::::::::S::::::::::::::::::::::::::::::::::A:::::::DPA:::::

consensus       MPELGWAYGYPAVMLGMALVAGVLLAYFRRQGYL
#oth            ....2.211...1121.1214331131.11231.
Hbo3162         ::::S:S:A:::::::::::TLI::YH:D:E:W:
HVO_1675        ::::::::::::T:::::::S::::V::::EHW:
Hut0739         ::::T:EF::::::::::G::ALMVF:::::S::
rrnAC1296       :::::::F::::::I::VI:V:::::H::QR:::
Hmu1685         :::::::::::::LVA:::IGVAM:::::::D::