5 genomes BUD1674 5 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1645 rrnAC1516 - Hbo2342 Hmu2097 - hla0899 - -

Pairwise sequence scores
Consensus score	416	hla0899	VNG1645	Hbo2342	rrnAC1516	Hmu2097
218	hla0899	885	129	163	132	150
235	VNG1645	129	422	162	167	141
266	Hbo2342	163	162	416	183	198
308	rrnAC1516	132	167	183	1239	255
258	Hmu2097	150	141	198	255	413

164 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111222222222222222222211222222222222
hla0899         :::::::::::::::::::::::::::MAGVVTLTAATSMLDRRSPSQFLPQTCQNSITD
VNG1645         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo2342         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1516       MFSGDFRSPGWPTSPPHSTHIPMSLSQWRSQTSRPHLSQVWSTSGRSQISHSPATLMVVG
Hmu2097         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------PLLQLGGLLASPLGALLV
#oth            222212222222122222122221122111111111111333312331133431212111
hla0899         RSTGRPRPHKLMPDLTVGPDMTASLAA::::::::::::FASS:PLQA:::::QA:Q:::
VNG1645         :::::::::::::::::::::::::::::::::::::::MST:::A:A:VTN::::TA:L
Hbo2342         ::::::::::::::::::::::::::::::::::::::::::--M:F::M:QT:::QAF:
rrnAC1516       SIADRLNLWRCDPERVANPTPGQSLLLATKYFPVAIPLYSML::::::S:PSL:--::::
Hmu2097         ::::::::::::::::::::::::::::::::::::::::::M::TI::FGTI:--::::

consensus       ALAAIAAVILIGRLVLKVAWRLVTIAAVAVAVLWLLSILGLQV-
#oth            214.3.22221.121123..1..321212113132214213422
hla0899         ::V:V:II:VV:KF:::L:::::::GI:L::AFF:::TA::V-:
VNG1645         ::G:M::LVF::::L:SI::K::AA:T:V::G::VV:V:L---:
Hbo2342         VVI:::::V:::::::R:::::::::::VIGL:L:F:FF::GI:
rrnAC1516       G:L:::V:L:V::::M:::::::I::II::::::I:G:::F::I
Hmu2097         G:::L:V::::::I:::F:::::VL:::::G::Y::GLF:IS:L