| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 2319 | hla0801 | HVO_2694 | Hbo2415 | Hmu1598 | rrnAC0922 | HVO_A0147 |
| 1426 | hla0801 | 2506 | 1252 | 1245 | 1193 | 1249 | 1277 |
| 1734 | HVO_2694 | 1252 | 2306 | 1972 | 1402 | 1430 | 1415 |
| 1690 | Hbo2415 | 1245 | 1972 | 2335 | 1363 | 1381 | 1372 |
| 1811 | Hmu1598 | 1193 | 1402 | 1363 | 2278 | 1790 | 1697 |
| 1961 | rrnAC0922 | 1249 | 1430 | 1381 | 1790 | 2389 | 2039 |
| 1903 | HVO_A0147 | 1277 | 1415 | 1372 | 1697 | 2039 | 2428 |
347 symbols consensus ----------R--R----------WMENLSDTQYAYLLLTPAFVLLGIIAIYPLLRTFEL #oth 1111233233122123232233221213111121..2..2.112..231.3...23..33 hla0801 :::::MSTDT:AD:GGSLLARPLN:L:TQ:EEV:::V::A:::L::ALV:F:::IE::RF HVO_2694 ::::::::::-::-::::::::::----::E::F::::::::LI:::V::::::AS::SM Hbo2415 ::::::::::-::-::::::::::-::S:TE::F::F:::::LL::LV::V:::IQ::GY Hmu1598 ::::::::::-::-::::::::::-:::::::T::::::::V:::::S:::::::::::M rrnAC0922 ::::MSTETG:ES:RSGALVSVMR:::::::::::::::V:V::::::V:L::::::::: HVO_A0147 MSADTAAEPA:ES:RAGPVVGFLR:L:::::::::::::::V::::::V::::::::::: consensus SLYADQLTGDARLGEFVGLDNYVDLFTGARNRALPGGSTFLPTGFG---FVAGLLNSALM #oth ..2.23223443223.1.33..12.11.33223112322111434332213342251..3 hla0801 ::L::AVASADPF:::I::::::::L::DTTFTQQFI:VSTTDS:PFVG:D:PF:QQ::F HVO_2694 :::::::::S:::::::::Q::I::::::::Y:::--:A::::FTSEFP::TNIYG:::: Hbo2415 :::::::::T::::Q:::IE:::A::S:::DF:::--:A:::GLSSSFP::T:IYS:::: Hmu1598 ::F:QTF::---::::::PG::::::::NMD:Y:::QP::::QSY::::-:Q::VT:::T rrnAC0922 ::F:--:SA:FSSTT:::AG:::E::::EK::Y::::T::::E:V::::-TSA::::::V HVO_A0147 ::::--VST:LSSVR::::::::A::::EK::F::::T:::::::D:::-A:S::D:::V consensus VTLIFAVFSVLFETLIGFGQALILDQDFYGRRWVRAAIIIPWAVPIVIQGMIFFLMFQPN #oth 2.13.133..1...1..21...1...1.1....1.11......1.1.....111.1.212 hla0801 :::A::IL::::::::::::::V::::::::::::VS::::::I:::::::::::L:N:T HVO_2694 :::::T::::::::::::::::::::::R::::::V::::::::::::::::WY:::::: Hbo2415 :::V:TA:::::::I:::A:::::::::R::::::V::::::::::::::::W::::::: Hmu1598 M::L::FV::F:::I::M::::::::E::::::I:::::::::::V:::::M:Y:::::S rrnAC0922 ::I::::V:::::::::L:::::::::::::::I:::::::::::::::::::::::NS: HVO_A0147 I::::::A:::::::::L::::V::::::::::::::::::::::::::::M:::::DSS consensus IGFLT------PPLADLGLLAPTNPLNDTADATFIIIVADIWKTSAFMALLILAGLQSID #oth 1..2211211124123..1421211.22231121211...1...1..........1...1 hla0801 :::G:::::::EFMQW::VFG-D:::SSST:SFM:VL:::::::T::::::::::::::: HVO_2694 ::::VGTTENPAL:NQ:::IG-:T::RN:::SL:L:::::V::::::::::::::M:::: Hbo2415 ::::IGTQENPAI:NT:::S--FT::RN:S:SL:L:::::V:::T::::::::::::::: Hmu1598 ::::::::::::::::::::::::T:::P:S:::V::::::::::::::::::::::::: rrnAC0922 V:::::::::::::::::::::::T:::::S::::::::::::::::::::::::::::: HVO_A0147 V::A::::::::M:::::VV::::T::::VS::::::::::::::::::::::::::::N consensus RGLYDVAKVAGASKWQQFKMITFPLILPTILVAMLFRSVAAMRVYGIIDTVAGCTTVPSL #oth .1.....1.1..12..1.13..1..11.222..1...123...1..1.12211.21.... hla0801 :::::::::S:::P::R:RY::L::VA:AL:::::::TMD:::I::L::AT:::E::::: HVO_2694 :S:::::::::::R::::::::::::::SV:::::::TIS::::::::E:M:::Q::::: Hbo2415 :S:::::R:::::::::::::::::::::V:::::::TI:::::::::E:M::::::::: Hmu1598 :::::::::::::::::::H::::::::::A::V:::::::::::::::I:SS::V:::: rrnAC0922 ::::::::::::T::::::L::::::::::G::V:::::Q:::::::::::SS::V:::: HVO_A0147 :S:::::R::::::::::RY::L:::::::G::V:::::Q:::::::::::SS::V:::: consensus SCLVVTTFNNS--EGTSAAIAFVTAAII-GIVVMGLIVWQGEDA--I #oth 1.1.1421334413111211..2..22.113..23212321323123 hla0801 T:::IIALQ::RRWA:AS:V::L::IV:S:F::VY:LALR:N:GGVA HVO_2694 :::::::::APL:Y::::TV:::::G:::A:::SVY::NFASED::L Hbo2415 :::::::::::M:Y::::TV:::::GL::::::SVY::KFADAEGGF Hmu1598 ::M::ES:FSGF:NAAAGT:::T:::::::L:::S::L::::E:::: rrnAC0922 ::M::A::TTR:::::::::::::::::::::::::::::::::::: HVO_A0147 ::M::S:::TH:::::::::::::::::::V::::I:L:::::::::