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5 genomes BUD1678 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0561

rrnB0038

HVO_0401

Hbo1100

Hmu1341

-

hla0473

- -

Pairwise sequence scores
Consensus score1111 rrnB0038 hla0473 Hmu1341 rrnAC0561 HVO_0401 Hbo1100
642rrnB0038 1077 478 402 518 477 541
702hla0473 478 1082 509 596 590 636
692Hmu1341 402 509 1071 579 624 596
778rrnAC0561 518 596 579 1107 687 697
867HVO_0401 477 590 624 687 1123 854
912Hbo1100 541 636 596 697 854 1118

152 symbols
consensus       MAIETVLLAVGPGDAERIDRLAEEAIDIAGPAGARVVLAHVFTDEEYDTALDRLDFDDTA
#oth            12223211.2133.221322.1222111.3111.3.12311..3111242442.212422
rrnB0038        ::L::::V:GR:::EGNGQQ::ST:::::K::D::::VGQI::::::E:SKTS:G:::AS
hla0473         :S:KK:M::::TE:E::TE:::::::AV:E::::E:::T:::::::F::VRS::GV:E:S
Hmu1341         ------M::L:HT:S::::E:T:TV:::::AT::S:I:S::::P::::N:TE::::S:P:
rrnAC0561       ::L:::::::::N::D:::E::DAVL:::S::D:T:IV::::::DQ::GVVN::E:ES:G
HVO_0401        :::::I:::::A::::::::::::T::V:::T::T::IG::::KD:::D:::N::::I::
Hbo1100         ::::SI:::::::::D:LE:::D:T::V:::T:::::::::::R:::NS:::N::::T::

consensus       -EVSPDDVAARHSTVRELVDRLDDAGVDYRIRGAVGDHGESIVDLAADVDADRLVVGGRK
#oth            222221311511323122334122.3222522112.4.1342121.53332.232...12
rrnB0038        :::::EQI::Q:GLFKSI:SQ::S:E:E:EL:T:T:P:AN::M::::::--:LII:::AN
hla0473         EGST::A::E::T:T:A:SEA:TE:::SHSV:::::::ADEV:EA:SAIG:::V:::::R
Hmu1341         :DADV:E:TS:L:I:::VK:S:E::KI::::T:RI:E::AR:::::TEEG::H:I::::R
rrnAC0561       ::AD::E::D::T::::::S:F::::LSTQV:::::N:::Q::S::EVTNS:LA::::::
HVO_0401        E:::A::::R::A:::::TR:F:::DI::V:H:R::H:::KL:E::GE::::::::::::
Hbo1100         D:::A::::M::::I:::::T::E:::E:D:::R:::::::::S::N::::::VL:::::

consensus       RSPTGKAVFGSTAQEVLLEAPCPVTFVRADT-
#oth            ...1.......11.2.11311...1...3241
rrnB0038        ::::::::::::T:D::VQ:::::V:::RE-:
hla0473         :::::::::::V::::::SS::::::::SAS:
Hmu1341         ::::::::::::::H::::S::::::::G:H:
rrnAC0561       ::::::::::::::::M:N:::::::::G:E:
HVO_0401        :::::::::::V::::M:::S::::::::::K
Hbo1100         :::A:::::::V::::M:S::::::::::::K