|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 3466 | HVO_B0034 | Hmu2042 | HVO_0530 | hla0766 | Hbo2678 | rrnAC0915 |
1859 | HVO_B0034 | 3373 | 1664 | 1462 | 1498 | 1295 | 1180 |
2728 | Hmu2042 | 1664 | 3458 | 2459 | 2588 | 1504 | 1367 |
2770 | HVO_0530 | 1462 | 2459 | 3328 | 2951 | 1396 | 1348 |
2884 | hla0766 | 1498 | 2588 | 2951 | 3505 | 1459 | 1383 |
1852 | Hbo2678 | 1295 | 1504 | 1396 | 1459 | 3571 | 1733 |
1739 | rrnAC0915 | 1180 | 1367 | 1348 | 1383 | 1733 | 3543 |
472 symbols consensus -----D-NDN-RLSRR-YLRAAGAAAA--AGLAGCSGGGGGDDGSDGSGGGDGGDGSSGD #oth 11123342334122114324442433311311...2.21134233323343322211232 HVO_B0034 :::::-:---:-----:-:K:LTVG::::::I:::T::::TETE:TE::N:N:SG::TD: Hmu2042 :::::MTD:SD:::::RFVE:T:::TL::I:::::::D::::G:DG:D::SENT:::--- HVO_0530 :::::-:---:-----:----------::M::::::::::SN::G:::TTEA:::::TTE hla0766 MSHDSRSD::N::T::H:VAG::TL:T::V:I:::::::D:S::::::D:S::S:::--- Hbo2678 :::MK:N:NER:F:::T:::LS:L:G:GM::::::::::DQTTTTEETT--ES:E:T::E rrnAC0915 :::MT:D:S:K::T::NA::I::::G::::S::::G:SD:::GS:GDGSS:::::ST::: consensus --AGTDGSDGGSS--SPLEVLHGWTGGDGAAAAEALEAAFNEEHPDVELNMNPIGGGANQ #oth 2233322321.4332431.12.1.22.1132.3211421.2.31.113323122211113 HVO_B0034 ::TE:S::SS:E:WD:Q:::::::A::::E::VT::IE::E::::EMDT:FQAV:AS::V Hmu2042 ::---::::::D:SGD::::::::::::::::::::VE::E::Y::M:HEF::::::G:: HVO_0530 ::::G::G:::::::A:V::::::::::::::::::::::::AY:::G:D:::::::G:: hla0766 ::---:::::::G::E:V::::::::::::::::::::::::V::::G:E:::::::G:: Hbo2678 TA:D:TTEQS:G-::NE::LV:W::A:GEKD:LQ::LDG:K::Y::::::N::AP:::GS rrnAC0915 GSS:DSST:S:TQY::T:::A:W:GE:::LE:IQSVMD::K:Q::::PFDE:L:A:::GD consensus NLDAVIANRLQNNNPPSSFANWPGKNLLRY--EGVLGDI-DDVWDENGFEDAMVQEAVEL #oth 1.212132.121311112113...21.42122422.323211..2213121214321221 HVO_B0034 ::N:T:LR::A::::M:::::::::::E::::S:A:M:LEA::::AE::K:T:QSR:::: Hmu2042 :::::V:::::::::::::::::::::Q:::::::::EA::S::::E::::V::::::D: HVO_0530 :::::V:::::SDD::GA::::::P::::::::::::SV:::::E::N::EV:ID::::: hla0766 :::::V:::::SDD::G:::G:::P:::::::Q::::SV:::::E:::::::::E::::: Hbo2678 A::T::K::VL:R::::T:QI::::A:TQ:VEGD::Q::G:S::SQE-MR::YR:GVQN: rrnAC0915 ::Q:N:RT:V::G:H::TWQA:::N::MPFTDANL:K::G:S::S::SM:::YL:GVKDA consensus HQQNGNYRAVPLGSHRLNNLFYNVSVVEEAGIDPDSLNSPSALIDALETVASETDAVPMA #oth 313213221..111..2.1....22.211..1.23..42121.3..22.133111221.1 HVO_B0034 CKF:DKMP:::I::::M::::::TA:F::::::AS::D:VD::L:::::IDQN::VT::: Hmu2042 ::Y::AF:::::::::::C::::T:::::::V:::::T:V:::::::::::T:::::::T HVO_0530 :::G:S::::::::::::C::::::::D:::::V::::::::::::F:::Q::::::::T hla0766 :K:::S::::::::::::C:::::::::D::::V::::::::::::F:::S:::::I::T Hbo2678 S:PA:::V:::INI:::::::::A::L::::V::A::SD:G::N:::D:I:::::::::: rrnAC0915 A:PA:::VT:::NI::I:::::::E:::D::V::T::ET::D:V::MA::D-:AGYTG:: consensus HAMSGPWTTTQLWAAVMLGVNGYDAYMN-FIEGN--GDESAVRSAFETTAEILENYINDD #oth 122321.123.11232212431222.332131.2223322.141121222322111133. HVO_B0034 Q::VA:::NL::::QILTSQS:VE::T:::::::::P:RA::VE:L:ALKT:N::::TA: Hmu2042 :G:::T::::::::ST:::KE::::::::::::S::P::A::Q::::SV::::::::::: HVO_0530 :::::T:::::::G::::A::::QP::D::LN:E:::S:::::::::::::M:::::S:: hla0766 :G:::T:::::::G:::::::::QP::D::L::::::::::::::::::::M:::H:S:: Hbo2678 :QIKS::SSV:::ETIF::Y::A:T:NSAIV:::IADH::::KESLQ:LKDYH:-HF:Q: rrnAC0915 :QTGS::SSF:MF:T:L::ETDAET:SAI:QN:EVDANSD:LE::V:::QSY:D-::PS: consensus AASISLTQANQNIINGNAAFIHQGNWAAGAFRNAENFEYDEDWGFKTFPGTEGMYTLHMD #oth .2.222131122112.3..11...1.11.312323313.222.13211..12.3.4223. HVO_B0034 :S:::F:T:G:KV:S:K::T::::::VY:M::ADDS:N:K:Q:DWIP::::::I:FY:V: Hmu2042 :S::G::ES:::::E::::::::::::::::::::D:::::::::::Y::S::::M::F: HVO_0530 :::LN::AS::::::::::::::::::::::::::::A:::::::::::::::::::::: hla0766 ::::G:::S:::::::D::::::::::::::::::::::GD:::::::::::::::::F: Hbo2678 :G:V:WD:::GKVV::D:::::::D::::QYKS:SE::::S:::MIP::::S:Q:SVVT: rrnAC0915 :G:::W:E::NQV:::E:::L:::D::::TYIT-NDLT:G:E:DHV:::::D:N:A:N:: consensus SFLYPSNNPSPEATKKWAAFVGSPEAQIAFNQYKGSIPTRTDVDMDEFGPFLQETAEDFA #oth .122.31..11.214315312.143..32..23...1.2...12222121112313..13 HVO_B0034 :IVA::::::R:E:IA:QK::::KK::::::NP:::V:L:::I:PS:LTD::AM:Y::LT Hmu2042 :::::::::T::K:D:FM:::::EA::V:::::::::::::::::SA:::Y::::Q:::: HVO_0530 :::::AD::T:::S:T:::::::::::::::::::::::::::S:E::::Y::::::::: hla0766 ::::::D::T:::S:T:E::A::::::::::::::::::::::S:E::::Y::::::::: Hbo2678 ::VF:K::::::::R:FLSYC:TVD::KR::PI:::::P::::PT:P::::::SQI:::K rrnAC0915 ::P::V::::::::TL:CQ:::TS:::EI::PK:::::P:::::T:P:ND:SKDQI:::Q consensus NAEARPPNLAHGLAVPPETMGALNDAISSEFTGPYNVEAATDGFVNAVSN-- #oth 11122..221..11121312232331121214223.1211332223121111 HVO_B0034 DS::Y::TI::::::T:K::::CKT:FGDN:M::F::::TA:AL:A:::E:: Hmu2042 :::E:::::Q:::G:DS:::ST:::V:::::S:::::::::S::ID:::::: HVO_0530 :::Y:::::Q:::G::S:::T:::EV:::::::::::D:::Q::LD:::::: hla0766 :::Y:::::Q:::G::S:::T::::V:::::::::::D:::Q::L::::::: Hbo2678 :SD:Q::TI:::T::T:DVH:DIDE:FA:-:NEQW:::G:Y:AL:::FP::: rrnAC0915 :SD:Q::SV:::::A::AVKSS:ES::::-----L:SG::PADV:SQI::AY