5 genomes BUD1688 6 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0046 HVO_1011 Hbo0504 Hmu1060 - hla0870 hla2088 - -

Pairwise sequence scores
Consensus score	578	hla2088	rrnAC0046	Hmu1060	hla0870	HVO_1011	Hbo0504
317	hla2088	809	218	218	265	236	254
384	rrnAC0046	218	593	411	301	325	319
375	Hmu1060	218	411	567	298	296	303
417	hla0870	265	301	298	597	370	351
435	HVO_1011	236	325	296	370	602	433
449	Hbo0504	254	319	303	351	433	739

123 symbols
consensus       --------------------MTSVEIEYCVPCGFLDRAEEVQEAILEQFGEELDRVALVT
#oth            11111111111111111111.141.1...1...122..4441312.42212221313..2
hla2088         :::::::::::::::::::::::::V:::D::::I:::T:T:TQ:::SC::PV:G:E::P
rrnAC0046       :::::::::::::::::::::SH:::::::::::RE::VH::Q:::SGLER:::S:R::M
Hmu1060         :::::::::::::::::::::ST:::::::::::RE::I:MS::::NGCER:::ELS::M
hla0870         ::::::::::::::::::::::RI:V:::::::M:N::RD:S::::K:::::I:E:::::
HVO_1011        :::::::::::::::::::::::::::::::::::::::QL:H:L:::::DR::::::::
Hbo0504         VELIECPSFTFNSPDGKRSD::EI:::::::::::::::TI:H:V:Q::::RVN::S:::

consensus       GDHGVFRVRVDDETVFDKAE--DEYDLDAIVRRVRSALG---------------------
#oth            .11..13.41.11312.1311111323131314122313122111111111111111111
hla2088         :ED:::E:::::TVI::VD:::L::::TT:MEG:CGQ:SACDCDPSELGGEDTDSTDCSP
rrnAC0046       ::::::::S::::::Y::::AA::LNA:::::EI::HVR:::::::::::::::::::::
Hmu1060         ::::::::N::G:::Y:::::::SAE::EV::T:::::-:::::::::::::::::::::
hla0870         ::D:::V::A:G:V::::T:::::::V:::::A:KPYV:AAA::::::::::::::::::
HVO_1011        :::::LT:T::G:R:W::S:::::F:P:LVL::::PHV::::::::::::::::::::::
Hbo0504         :::::LT:A::::I:W:::D::::::V:E:T:::::::-:::::::::::::::::::::

consensus       ---
#oth            111
hla2088         GCC
rrnAC0046       :::
Hmu1060         :::
hla0870         :::
HVO_1011        :::
Hbo0504         :::