| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||
|---|---|---|---|---|---|---|
| Consensus score | 2903 | hla1448 | Hmu1527 | rrnAC0814 | HVO_1184 | Hbo0376 |
| 1648 | hla1448 | 3074 | 1127 | 934 | 980 | 1036 |
| 1851 | Hmu1527 | 1127 | 2935 | 1239 | 1253 | 1260 |
| 1572 | rrnAC0814 | 934 | 1239 | 2302 | 1096 | 1073 |
| 1886 | HVO_1184 | 980 | 1253 | 1096 | 3078 | 1550 |
| 1923 | Hbo0376 | 1036 | 1260 | 1073 | 1550 | 3193 |
473 symbols consensus -----QERAC------------------------------LIGRRLRIAGVAVVGVAAVV #oth 223334434311111111111111111111111111111124323.33323223331323 hla1448 LSKYES::RR:::::::::::::::::::::::::::::::SA:::EDQ:R:PR:ARPRW Hmu1527 :::::-----::::::::::::::::::::::::::::::-MR:S:TVGLAG:L:I:L:L rrnAC0814 :::::MGDG:::::::::::::::::::::::::::::::ATMG::K:V::L::A::::A HVO_1184 VGRRVGVE::GTVPRTAVALGRSTYVPPVSCVHKMGLTSA:F:GK::::L::L:L::::: Hbo0376 ::MSG:I:SV:::::::::::::::::::::::::::::::::ST::T:VT::AVL:VL: consensus GGAVALGVLGTPSVARVDNR--FGGVNNTTTTIETDLGVSNPNPRGIRLGGVAVNYSVSM #oth .34212123.1122321212111231323212231224231.2.4124.221311.2.3. hla1448 :HRRG:RRR::RRAE:RRH:QHLRRRDQRDHGDRNGS:RFE:E::::G:DD:S:::T::: Hmu1527 ::G::::::::::L:G:::Q::::P::E:::VVH:::HLR::::I:V:::N:R:::::A: rrnAC0814 ::S::::::::::::S:::H:::A::S:Q:::VA:::T:T::::V:VQ::::GL::T::: HVO_1184 :A:F:A:II:A:::D::::::::::::E:A:V:::::Y::::::LSAN:S:L::D:G:E: Hbo0376 :VL::T::V:A:A:TG:E::::::A:T:E::::::TIS::::S:F::S::::::::::W: consensus NDVRMAQGEREGVRVGTGNSTLNLTTQLQNERIPPWWVSHVRNGEHTTVDIDATVTSEML #oth .1132.3.313.13222.1211322.323.13.12..21.12...2.313111123133. hla1448 ::IQ::::G:::::::::::::G:E:::R::E:::::::::::::R::L:::::A::GR: Hmu1527 :::TL:S:Q:D::::P::::::::::AID::Q::V::YT::D:::T:A:::::R:ETP-: rrnAC0814 :G:E::::D:Q:IGL:::::::QF::DM::D:::::::T:ID:::T:::G:::::::S:: HVO_1184 :GI:::T::K:::S::Q:TTAVP:R:T:E::C::E::::::Q:::::DLAVN::IS:::: Hbo0376 ::::I:D::KS::AIDS::A:V:T:::M:::::I:::R:::::::::V:Q::P::R::T: consensus GRTFVAFSQSREIETDLLSQFNSTETRPVNANSPLVSDPVLYINETRGAWG--NVTESET #oth .232322332.313..2111.1.21.1111.22.211.....1.1.112.122222323. hla1448 ::S-:D::R::::Q::::GA:::D:::::::D:::T::::::V:::::E::::S:S:::: Hmu1527 :EA--SLG:::A::::IAG::D:::::::E::R:F:R:::::::R:::::DRP:::RQQ: rrnAC0814 :GQS:S:::E:T:::::::::::::::::E:DQ:::::::::::::::::DQE:L:Q::: HVO_1184 ::::E:PEIT:S:D:::::A::::::SEI::E::V:::::::V::::AE::::ES:DER: Hbo0376 ::::G:PNVT::VN::M::::::SA:::::::::V:::::::::::NAT::::E:N::V: consensus PLELAFTVYNPKPYPYTVTELGYDISMNDVAVGEGETDRGYVIPPRSTETIEATTAIQND #oth 11313.2.1..122.121122..112..1.31.2.31221.21213212.21211211.2 hla1448 :I:M:::::::NIE::V:::I::::T::G:EM:S:Q::E::S::SY::::V:F:::L::R Hmu1527 ::D:S:::::::SV::::SKV:::VT::G:P::::::::::LLE::T::::R:NA::R:: rrnAC0814 ::N:::D::::::::::I:KV::T:R::::T:::::::::::LN:GEKT:L::N:::::E HVO_1184 A:::T:V:H::::::IA:S::::::::::::::::T:NSE:::::::::::::::H:::: Hbo0376 ::H:K:V::::::::I:::R:::::::::::M:D:ASES::::::K::K:::T::Y:R:E consensus RLDEWWVTHLDRN----QVTDLRIDFYARLDA-GGETARIPLDALTYEETIETDIF--GN #oth 2..2..11.12121111.2.1.212122432413223422211222.2322112211112 hla1448 H::D:::::::EEVRGH:::G:::E:::VIEFPT::E:T::::::::::::::E::DE:: Hmu1527 :::::::S:I::D::::::::::::::LLVEV::E:QF::D:::ID::QR:::::::::T rrnAC0814 N::R::::::Q:::::::Q:::----------:-------------:RR-------::-- HVO_1184 ::::::::::E:D:::::T:::H:::::N::::::T:L:V:::P::::K:F::::::::: Hbo0376 N:::::GS::E:::::::::::::::H::::L:A:::I:::::::::T::::::L::::T consensus KAANASAETDDGGTATATNDDAETTAD-TTTET-T-DG----G----------------- #oth 233343432423433343433443332322222323222222111111111111111111 hla1448 DVR:::ESSE::SDDGGDG::GGE:S:G::NGGN:T:::::::::::::::::::::::: Hmu1527 ::T:E::T::EATP:S:S::S:T:G::SR::::DSD::LDPT:::::::::::::::::: rrnAC0814 ---------------------------:-----:-:--::::-::::::::::::::::: HVO_1184 :::SDGS::T:EP:::E:TEAT::AE-:-----:-:--::::-::::::::::::::::: Hbo0376 :P:TMAN::GE:::E:S:DN:DSS::TE:A:::A:PTETAAE:DDDGGLLDDGTATETAT consensus -SETATATATGTATTTTT-TT-TDDGSADGTDETDDGLLP------------- #oth 131233424132412222321322333431323211.2223111111111111 hla1448 :N::DDGNT:ENG:----:--:-:::TEN:::DG:::V::L:::::::::::: Hmu1527 :::VTET:V:::E::P:ATP:E::::IL::GS::G::V:-::::::::::::: rrnAC0814 :-----------------:--:-SRP::S:L:PEGE:RK:R:::::::::::: HVO_1184 ::::::S:::T:S:A:::A::A:TPS:D:::TT::::::-::::::::::::: Hbo0376 ST::::::S:::::::E:E::TETETATETAT::::::FSFRPSADSAVRTLR