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5 genomes BUD1693 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1864

HVO_0764

Hbo0768

Hmu0844

-

hla2663

- -

Pairwise sequence scores
Consensus score1913 rrnAC1864 Hmu0844 Hbo0768 HVO_0764 hla2663
1351rrnAC1864 1926 1264 1140 1156 1247
1359Hmu0844 1264 1894 1196 1194 1240
1543Hbo0768 1140 1196 1933 1424 1318
1613HVO_0764 1156 1194 1424 1934 1405
1589hla2663 1247 1240 1318 1405 2036

274 symbols
consensus       --MLTGERAVAAAGIDAVALKPAECDVRAALELPVDTVAIDYEGREHLPDADVLRRLAAE
#oth            111..13221242.1..1....2.1..24.332132211.....1221.1321133..23
rrnAC1864       MTT:::A-TL::::::::::::T:V::SQ:TA:D:E:L::::::AA:V:ET::IE:::ST
Hmu0844         ::::::V-TLDDV::::A::::::V::T::SD:D:S::T:::::AG::::RST:AA::DQ
Hbo0768         ::::::::S:SQT:::::::::K:::::M:::T:F:::::::::::Y::::::::E::DD
HVO_0764        :::::A::::SK::L:::::::::::::E::SV:L:V:::::::::R:::E::::D::::
hla2663         ::::::RE:::R:::::::::::::::SR:A:::I:R:T::::::::::::ET:D:::::

consensus       AEVRLTTPVRADGFDPLGDDSLIDTLPDGVRRVLVAGHGAYLTDDEAARAVAPRLRAARE
#oth            22111.....11....1...124221.22112......3...131.14...2...3.133
rrnAC1864       :N::V::::::N:::::::::GF::::ADA:H::::::S:::S:::::::::::::::VD
Hmu0844         KR:::::::::::::::::::ALA::::::G:::::::D::::N:::E:::V:::E::AA
Hbo0768         R:::::::::::::::T:::E:WEWI:E::::::::::A::::ES::G:::S:::A:GI:
HVO_0764        K:::::::::T:::::::::::YEW::::::Q:::::::::::::::R::::::::::::
hla2663         ::LYV:::::::::::::::::::KI::PA::::::::::::SK::SS:::::::G:::R

consensus       RAPDAWVGTEGIERVALAAGGTQYELLSRSTARDVRALRAAGFDGEIAVYAPTVLTDDED
#oth            21211......1..2...2....1.....2.4111.2..11.12.11.1...11.11111
rrnAC1864       DTSNP:::::::::L:::V::::::::::T::::::T::T:::::S::::::L::SNS::
Hmu0844         T:T:P:::::::::::::I::::F:::::::G::L::::T:::E:::::::::::::::S
Hbo0768         ::::::::::::::::::V::::::::::R:ESNL:::::T:Y::::::::::::S::::
HVO_0764        ::::::::::::::I::::::::::::::::R:::::::::::G::V:L::::A::::D:
hla2663         D::::::::::V:::::::::::F:::::::D::::G:::::::::::::::::::::::

consensus       EILDAVGAYAARRRPVARALPDG------------AATDASATGRARDVLGAAVRDYALV
#oth            22.....1.21..1..13...1111111111111112..13.31.1.1..42.31.1..1
rrnAC1864       AM:::::D:T:::G::RN::::::::::::::::::P::SR::::T::::KQ:I::::::
Hmu0844         :::::::D:::::G::RA::::::::::::::::::::::T:S:::::::TQ::G:::::
Hbo0768         :::::::::::::::::K:::E::::::::::::::E::SN:AD::::::::::::::::
HVO_0764        :::::::::VS:::::::::::D:::::::::::::::::::E::::E::LK:S:::::I
hla2663         VV:::::::V:::::::::::::DGDGSGDDPDTAPP::::::::T:E::S::A::F:::

consensus       GSVETVRERIDALRDAGADAIVGYPARGIDEFLE
#oth            .11121111234.221.2.41.......211133
rrnAC1864       ::::::A::TKR:H:I:V:T::::::::L:P::S
Hmu0844         :DP:::A:::EQ::A::::::::::::::EPVR-
Hbo0768         ::::R:::QVST:KE::::V::::::::VE::V:
HVO_0764        :::DDI:R:::D:::::I:LV:::::::V:::A:
hla2663         ::P::::::V::::E::V:HV::::::::::::L