| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||
|---|---|---|---|---|---|---|
| Consensus score | 3310 | hla2666 | HVO_0564 | Hbo0966 | rrnAC2349 | Hmu0448 |
| 1854 | hla2666 | 3352 | 1372 | 1408 | 1400 | 1359 |
| 2112 | HVO_0564 | 1372 | 3307 | 1845 | 1580 | 1515 |
| 2528 | Hbo0966 | 1408 | 1845 | 3306 | 2063 | 1868 |
| 2450 | rrnAC2349 | 1400 | 1580 | 2063 | 3290 | 2112 |
| 2375 | Hmu0448 | 1359 | 1515 | 1868 | 2112 | 3261 |
443 symbols consensus MTMDRRTLLKHIGGTGAIAALAGCVGVQ---------EQGTDGDDG--A-GGESSDGADG #oth 1323..12..321121232.11..211333321112222133213.11232323231223 hla2666 :NEK::::::TM::ST:L::::::ISTGGDGG:::DGGD:S::S::::SN:SDG:::S:: HVO_0564 --:N:::I::QLA::T:VG::::::::SETDSTQTSEQS:AE::::::-:SE:TTA::ET Hbo0966 ::::::SV:::L::V:V:G:::::::::KQN::::::::S:QS:S::::TE:GN:KATEM rrnAC2349 :::E:::V::R:::V::AT:::::-S::::::::::::::NG:SE:ET:S:DG:G:::S: Hmu0448 :GF::::::::::A::T:::VG:::::E::::::::::::::A:A:::-::::::N:T:S consensus ESSGPAGTATAWYQLSDAEDEAREDAIETFNSETAHTI-KGADIANLRKKTTSAIPAGQG #oth 323223.1211.221222.4112133332132214213112231221422111.....1. hla2666 SD::TT::T:L:AD::A:::::MSGY:DEYE:DSGD::N:E:PGGE:DQQLET:::::D: HVO_0564 ::A::S::F:L:H:RAE::K::L:ANA:::T::::::A::P:E::D:::::::::::::: Hbo0966 :::::::::K:::::::T:VPL::E:LQ:::DQ:K::L:D:S::S::K:::::::::::: rrnAC2349 G:QQSG:::::::::Q:S:IP:::::M:::A:::EFGV:D:S::S:ME:::::::::::: Hmu0448 TTEE:::S:::::G:::T:L:L:::I:AA::E:SS::::::GN::EMQDR:::::::::: consensus PETFEWAHDWVGDYYQRE---FVVDQSDELSVSLDQFTDAAAEAVQFDGATVGLPHSAET #oth 12313.....2.211212111.12.2..311.1.131.33.33.2.1.1.321..211.. hla2666 ::SWI:::::::RFAV::EPP:LY:A::DVD::::SY:ET:RQ:A:::::LH:::FAS:: HVO_0564 AGM:D:::::T:E:::NG::::LS::::Q:D:D:SVY:RP:Q::::::::::A::YA::: Hbo0966 :T::::::::G::::::N:::::::K::A::::::T:::G:T::I::::::I:::::::: rrnAC2349 ::V:::::::::::::::::::::::::::::::::::::::S:::::D:V::::::::: Hmu0448 ::::Q::::::::::E:G::::::::::::::D:::::S:::G:::T:D:I::::F:::: consensus VALIYNTDMVDEAPETIEEMKSIMEEYHDPANGQYGLSYPF-DPYFVSGWAQAFGGYYFD #oth .2.1..311..21...331.213.131..12122...13.2112..3.1211.1..21.. hla2666 :::F::E:::::P:::M:::V:::DDH:::::::::::::VT:::::::FI::Y::DI:: HVO_0564 :G::::RE:::::::::AD::A::::::::E:WM::::::L:NA::M:A::H:::::::: Hbo0966 :::::::E:::S::::VS::::V:::::::ES:M::::C::::G::::A::::::::::: rrnAC2349 :T::::::I::::::::DD:V:A::S::::SSS::::AA:::::::T:::I::::::::: Hmu0448 :T::::A:I::KP:::F:::AAS::A:::S:::K:::AM:::N:::I::I::::::R::: consensus PESNPALGLDSDATVRGFQFALDNLVPYMPNDPGYEPQAAAFAEGNAPFAINGPWYLATL #oth 2.32341122311234.2212.11121.2.3.12121.212.21.1.11.1....2.221 hla2666 -:E:LKVTV::::CKQ:ID-::ET:SD:V:S:::::S:IV:::D:L:::::::::E:GN: HVO_0564 -:::VE:::SNE::LD::::I:::F:::Q:K:T::D::::V:L::::::::::::F:GDV Hbo0966 H:KETQ::INI::::K:::::::::::::::::T:G::::::::::::L::::::::S:: rrnAC2349 ::QD::::::A:EAIE:L:::::T:R::::D::N::::::T:S::::A::V::::::::: Hmu0448 :::D:VV::::EE:::::E:M:::::::::::::F:::Q:T::::::A::V::::::::: consensus NDSDINYGVATLPSPDGG-EPTPYTGIKMWYFSKAM-EADNADATAARAFAEWYTTNEDH #oth 233221211221.332.2122211111322..2231122142223.32412..12.11.2 hla2666 Q:EID:L::T:::TV::N:N:RT:S::QLF:::SMLAD::QSTVD:TTGL:::::::::I HVO_0564 RSN::DA:I:R::::E:DA::E:::TV:QL::TSTL::G:E:T:A:S:::::::::DT:V Hbo0966 :EKG:D:::SK::A:E:::K:::::::T::::::::::::::STQ::LD:I::::::::I rrnAC2349 :Q::V::E:::F:DIN::::V::::::S::::ADG::SEGG:::::::N:V::FA::::: Hmu0448 :::::::E:T:F::M:::::F::LS:::::::::::::EGDV::::G:E:I::FV::::: consensus LLRNAEEQGYIPVLDSLAGSDDLPDAVQAFSQAVDQGVPMPTHPRMNDVWTPLEDALNRA #oth 2232.2.1.31..143213111.133.121113.22.2.1.11.3.33.13112212442 hla2666 V:S::D::::::::TNVVDN:::SSE::::A:Q::H:::I::::D:DS::::VT:::E:V HVO_0564 :SA::::F:::::HKE::S:S:::E:::G::ES:SL:T:I::::N:G:::G:::::F:SV Hbo0966 :::::K:::AV:::ERI:T::E::::::G:::::Q::::::A::K::A::::VK:::TK: rrnAC2349 AT:L:::::S:::::::V:::E:::H::TY::T:S:::::::D::::K::S:::N::IE: Hmu0448 ::TR:::::H::::S:::::::::GP:R:Y:E:::::I::::D:::S::FAA::EPVVQI consensus FNGDADAAAALDQAAEEIRSNWE #oth 1.1222424.224.1322.1111 hla2666 ::DEQ:SD:::::::S:::EAL- HVO_0564 K::::ELES:FTK:E:N:::::: Hbo0966 ::::::V:T:M:E::KTV::::: rrnAC2349 ::::SS:ED::TT:::::::::: Hmu0448 :::SQSP:Q::AG::D:A:::::