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5 genomes BUD1699 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2123

HVO_0395

Hbo1108

Hmu0237

-

hla0141

- -

Pairwise sequence scores
Consensus score2615 HVO_0395 Hbo1108 hla0141 Hmu0237 rrnAC2123
1663HVO_0395 2663 1552 1300 1218 1165
1740Hbo1108 1552 2639 1223 1261 1223
1697hla0141 1300 1223 3191 1242 1246
1864Hmu0237 1218 1261 1242 2572 1633
1894rrnAC2123 1165 1223 1246 1633 2607

426 symbols
consensus       -MDTVYAALDDRVLVVD--GDDGWTARRRLAGHDIECVAA--------------------
#oth            12433111331211233122222233331343232..12211111111111111111111
HVO_0395        :-MQL:::ANGA::A:AGSP::S-:T::::GE:R::::::::::::::::::::::::::
Hbo1108         :-------MRGG:::AHGP:::SPA:H:KFD:Y:V::LES::::::::::::::::::::
hla0141         METR::::Y::GLRI::::PET:-:VSH:::DRAV::LSVVSGGTESGGTGGDGECIDGD
Hmu0237         ::P:C:::::::L::IE::-::D:M::E:PVA:SL:::::::::::::::::::::::::
rrnAC2123       :::::::::G:::::G::::NS::DDCL:--:::::::::::::::::::::::::::::

consensus       ------------------------APAAPARAFCGTFDAGLQRTTDGGASWERVGDD-LG
#oth            1111111111111111111111112332121112.1211.12111.1.311221223311
HVO_0395        ::::::::::::::::::::::::D:R::D::::::::::VF:::::::::HA::T:A:P
Hbo1108         :::::::::::::::::::::::::D::::C::::::NT::H::D:A:ET:H:::K:T:P
hla0141         GSGGDGSGGDESRGDESRGDGSKRDRS:G::VLA:::::::F:S::::G:F:::ATES::
Hmu0237         ::::::::::::::::::::::::::ER:E:V:V::V:::::CS::::D::TTGL:T:-:
rrnAC2123       ::::::::::::::::::::::::EA:E:E:::V:PS::::::::::::T::T:L:A:-:

consensus       ------DRVTSVAVSPHDPDVVWAGTEPSAVYRSADGGETWTELPGLTELDSASRWSFPP
#oth            11111122..1111..1112.111.....1.1..4.1.11132332.2312..12.1...
HVO_0395        ::::::ES:::L::::AA::::Y::::::::F::R::::::A::AP:SA:::::S:A:::
Hbo1108         ::::::KS::::::::::AE::Y::::::::F::D:A:::::K:N:::D:S:::S:::::
hla0141         PGGSGSEA::A::T:::::E:::I:::::R::::T:::::VERIG::::VP:::E:::::
Hmu0237         ::::::::::A:T::::::G:I:::::::R::::I:::DS:S:R:::QS:P:::::::::
rrnAC2123       ::::::::::::T:::::A::::::::::::::::::::::::K:R:::::::A::::::

consensus       RPDTHHVRWIEPDPADPDRLYVAIEAGALVRTPDGGETWVDRPDGARRDNHSLATHPDAP
#oth            ..1......1122.3.11221121....11213.1..1.3.113111..1.211..2.1.
HVO_0395        ::H:::::::::::T:A:::F::V:::::::SF::::::Q::VASSK::T::M:::L:R:
Hbo1108         ::H:::::::::::H:::H:::S::::::IQ:H::::::S::VPS::::T::M:::T:::
hla0141         ::::::::::::C::::E:WF:GV::::::V::::::::::::E:S:::::A::::::::
Hmu0237         ::::::::::AV::::::::::::::::::::D:A::S:E:H:::::::::T:G::::::
rrnAC2123       :::::::::LALA:D::EQV:A::::::F::S:::::::::H:::::::::T::::::::

consensus       DRVYAAAGDGYAESRDRGDTWTHPQAGLDHRYVWGLAVDPADPDRALVSAASGARAAHST
#oth            32112.....1.114.2.22.24124..3.2.1.11.1222..242211..21124..22
HVO_0395        G::WV::::::::TD:A:E:::T:T:::G:G:C:SV:I:::::ESV:LT::::PMR::RV
Hbo1108         :HAW:::::::::TS:G:E:::Y::K::N:Q:C:SV:::A:::S:I:::::QS::V::NV
hla0141         NL::::::::F:::G::::S:RVVDR::::G:::::::::G::ET:::::::::G::::-
Hmu0237         E:::T::::::::::::::::SF::S::::::::::::G-::::DVV::::T:::D::::
rrnAC2123       ::::T:::::F:L:T:::AA:::::E::A:::::::::H:D:::C:I::::::P:S::::

consensus       -HGESYLYRR------------------TGDE----------------RWERLDD-GLPT
#oth            2311111..111111111111222222131.2111111111111111131212222.1.2
HVO_0395        ESAAA:::::::::::::::RDSPDDEGD:::::::::::::::::::S:D:::ET::::
Hbo1108         D:A:::::::::::::::::::::::::::::::::::::::::::::T::Q:GS::I::
hla0141         :R::A:::::SVGGDSRRDDRGDDRENGR::DRGDGGNGRSAASDSGP:F:::::R:I::
Hmu0237         :E:::SV::::::::::::::::::::::D:-::::::::::::::::G:::AMS::::D
rrnAC2123       ::::::V::W::::::::::::::::::N::-::::::::::::::::::TQSM:::::G

consensus       GEGLARAVLAAGRTDGEFYALTNRGLYRTRD-GDSWER---VGADWPAEY-RQVPRGLAV
#oth            12.33.11.222231.322.2212..121413.221321112342122321223121.11
HVO_0395        :S:AT:::::::::G::C::AND::::::T:F::::D::::IEVP:DGT-::RTAA::::
Hbo1108         :S:IV::::DR::RG:::::V::::::::G:G:::F:::::::I:::DAFE::::S::V:
hla0141         :::TY:::::S::A::TMW:VH:E:::::::A:E:F::::::P::L::S-:--PA:A::I
Hmu0237         PD:::::::::--H::Q::::::H::FASD:::RA:SA:::L:LA::D:::::L::::::
rrnAC2123       P:::::PI:S:AP:::-:L::::H::FQSKH::ET:VKQNL:SG::T::::D:::S:::I

consensus       V-----
#oth            121111
HVO_0395        :A::::
Hbo1108         :PSSAP
hla0141         E:::::
Hmu0237         ::::::
rrnAC2123       ::::::