|
Pairwise sequence scores | ||||||
---|---|---|---|---|---|---|
Consensus score | 1941 | HVO_1726 | Hbo3095 | hla0237 | Hmu0518 | rrnAC1942 |
678 | HVO_1726 | 1427 | 671 | 351 | 366 | 363 |
793 | Hbo3095 | 671 | 1739 | 407 | 368 | 465 |
1146 | hla0237 | 351 | 407 | 2021 | 751 | 795 |
1257 | Hmu0518 | 366 | 368 | 751 | 2032 | 878 |
1257 | rrnAC1942 | 363 | 465 | 795 | 878 | 2055 |
284 symbols consensus ----MTDD-G--D-QFLTGSP-R-AMLAALREEP-RPT-LCD-VDATRTTIQRILAGFRE #oth 122222223233231212112313221221222131123122312111112111222231 HVO_1726 ::::----:-::-:-------:-:----------:---:---:----------------- Hbo3095 ::::----:-::-:-------:-:----------:---:---:-----------VSA:A: hla0237 MAQT::A:D:HDGV:Y:A:::V:V:::R:::S::R::AS:TAA::::::::::::S:::: Hmu0518 :::::::REVMS:L::::::RH:AT:::::S:::L:::E:::R:E:::::V::::::::: rrnAC1942 :MAEGL::T:FE:C:::::::Q:F:V::Q:::R:A:::D:::T::::::::::::::CT: consensus RDWVEKR--DGAYALTATGQRVHDRYEELLETVERADRLGPLAANLGRIAADLPPEALDR #oth 241221311324143142132.213.321331124.123231122133242221133123 HVO_1726 -------::-----------M::E:::RFI::::C:::MSEFL::AAD:CENA::GV:GQ Hbo3095 KG::::QPDS:T:::::A:DV:A:S:D:FET::AV::S:SV:LS:::T:VS::D:TI:H: hla0237 ::::V::::GA::HV:P::K::::A:::::DE::L:::Y:QF::D:E:VG::F::S:::T Hmu0518 :T:A::I::::R:RA:L::::::E::RT:W:::::::::A:::TH:D:FDEP::V::F:: rrnAC1942 :Q::V::::::E:Q::V:::::F:Q:NT::SEIDQ:RTV:::::H::A::::::::L::P consensus GNITTAADQNPLAAIDRFLEWLRDDNGDRIRAITPIVSRVFNEAAEELLETDTRIELVID #oth 3421212132.1.121.32231224411421221.1.332..3213321231342.211. HVO_1726 M:::::::ND:H:PLN:Y:TIVGSEPV::F:GV::::::::::S::AV:GE:::M::IV: Hbo3095 LHGA::T:DD:H:P:N:::TVVG::YV:DF:G::::::::::Q:::RVIGP:SN:::::: hla0237 :EL:V:::R:::::V::LT:L::EGS:SE:::VS:V:IQQ::N::A:A:DAGAEV::::: Hmu0518 :S::E:TE:E::::V::IV:::::SQ::H:ETT::::ANT:::TVSG:::::LSV:M::: rrnAC1942 ECL::SSE::::::::::TD::HEV:::-V:::S:::TS:::D::V:::::G:H::FI:: consensus RRVLERSMSDFPDALERALEHDQFDLYVSPEPLDFGLMLVDDRACVAAYDERNNLRAVLE #oth 24.2.2.332132221.1332133323.3313123.13232322314...321.221321 HVO_1726 :G::::::DAY::SF:::RDL:::E:R:TE:N:::::LV::GHGL:S::::H:::T:LVD Hbo3095 E::Y:T:V:EY::D::::F:L:::Q:F::ATR:::::::::NH:FLG:::QHG::I:SVD hla0237 :D:V:E:IAE:GP:TD:::HD:GATV::::::IEY:VFRY::L:::T:::S:::P:C::: Hmu0518 EN::::::T::ET::::GQT:ECV:VW:A::::TD:::VRS:::A:V::::T::V::::: rrnAC1942 HS:::::A:::S:::D:G:::ENI:T::HDTT::I::A:DRS:V:L::::D::::::IA: consensus SDDEAVVDWAERQFESYR---------ERAQPLAGVLSNS---- #oth 11123114.22441233211111111132231223133433332 HVO_1726 G:ASE::S:V:ILY::V::::::::::STSV:IDRLEP--:::: Hbo3095 GT:::F:E:::QTYQQ::ADADTPTAV:ETT:ES::THG:ANDQ hla0237 :T:SG::::VDDK:::FV:::::::::AE::C:S::VE:T:::: Hmu0518 ::::T::G:GR::::TTK:::::::::D::R:::D:::E:SVEE rrnAC1942 ::AT::YH:::TV:DR:::::::::::::S::::A:::VQEKN: