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5 genomes BUD1705 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2347

HVO_0563

Hbo0967

Hmu0449

-

hla2667

- -

Pairwise sequence scores
Consensus score2356 hla2667 HVO_0563 Hbo0967 rrnAC2347 Hmu0449
1432hla2667 2472 1312 1300 1330 1357
1870HVO_0563 1312 2318 1759 1737 1658
2051Hbo0967 1300 1759 2384 1908 1870
2147rrnAC2347 1330 1737 1908 2370 1951
2027Hmu0449 1357 1658 1870 1951 2384

341 symbols
consensus       ------MSTVSRAARRIADVPFLSRDDASLLLVLPGLFVFSAFMLFPVLYLVGISFTNAA
#oth            11111122311223412133.13322.42..1.1..111.21...1.11..211.1.1.4
hla2667         MASSQIGTD::GLS:LR:AL::S::-:WG::::A::VLL::S:::Y:IF::FY::L:D:T
HVO_0563        ::::::::V:DS:VE:V::S:VV:K::LP:::::::::::L:::::::::::YL:::::E
Hbo0967         :::::::::A::V:T::::::::DKE:T:::::::::::::::::::::::::::::::R
rrnAC2347       ::::::::::::::D::ES::::T:::::::::::::::::::::::::::L:::::::Q
Hmu0449         ::::::---:::LTQ:VERI::IEQE:Y:::F::::::::A::::::::::::L:::D::

consensus       PANLFAGEG--AVLTFG-AEFVGLANYVDVLTDGQFWNSFGVTWLFVATSVALKIGLSLG
#oth            1.2112.223321111131321..3..23213.22..1.111...1.11.121.233222
hla2667         F:GSVI:G:::------:::LI::::::QLIG:S:::T:MTT::::::V:LV::VF:AV:
HVO_0563        ::T::Q:K-::------:EQW:::::::T::S:::::::M::::::::::::::VLVG::
Hbo0967         ::::::::TALD:::::Q::::::Q:::SA:::PA::::::::::::G:::TA::AF:V:
rrnAC2347       :::::::::VV::::::D:L::::E::A:::::::::::::::::::::::T::::A::A
Hmu0449         :::::::::SF::::::E:T::::K::T:::A:PE::::::::::Y::::::::L:::IS

consensus       IALVVTSDRVRGKRFMRSLIIIPMGLPAIFTITVWRGIFSSAEFGLANQILRAFGA----
#oth            111111221.1.1.31.111.3.1.1.2..11.1..11..2.21.13.121343131111
hla2667         :::LLNHV::A:::Y::AAV:V:L:F:G:::::::::M::D:RY:VF:T::GRYNEFMSS
HVO_0563        :G::::GE:::::::::A:::::L:::G:::::I:::::::::::::::F::MA:L::::
Hbo0967         :::::::::::::::L::::::::::::::VV::::::::T:::::::::::EI:F::::
rrnAC2347       :::::::EL:::::VL:::::F:::::P::::::::::::::::::M::L:T::::::::
Hmu0449         V:M:::::::::R:I::::::L::::::::::::::SM::::D:::I::LFEQ:::::::

consensus       ----------ESVAWLSGRWTAFLAYNVTEAWLAYPFMVIITVSALQDVPEELHEAAMVD
#oth            111111111131111..3..3..2..11..2........1.1.......111.....21.
hla2667         LSAPELLLFDVPIGF:::::E::F::VT::V::::::::::I::::::::RS::::::::
HVO_0563        ::::::::::D:I::::E::M::::::::::::::::::::::::::::S::::::::I:
Hbo0967         :::::::::::::::::Q::::::::::::V::::::::L::::::::::::::::::::
rrnAC2347       ::::::::::S::::::::::::V:::::::::::::::::::::::::::::::::V::
Hmu0449         :::::::::::P:::::T::P::F::::::M::::::::::::::::::::::::::T::

consensus       GAGFLARFLHVTLPSIKRPVLFASILTAAASFQQFLIPFVFNQGGPARANELIVVYGYRE
#oth            ...222..311...1..1..1..1...1.1...1....2.......1.2...11......
hla2667         :::A:Q::RT::::A::G:::::::::::T::::::::W:::::::S:Q::::I::::::
HVO_0563        ::::F:::::::::::::::::::::::::::::::::Y:::::::S:T:::LI::::::
Hbo0967         :::YVS::::::::A:::::M::::::::::::A::::Y:::::::::::::::::::::
rrnAC2347       ::::::::A:I::::::::::::::::S::::::::::::::::::::::::::::::::
Hmu0449         ::::::::I::::::::::::::A::::::::::::::::::::::::::::::::::::

consensus       ALSFQQYGRGAAISLIAVVFIGAFMWLNVKKGKLADGVSDE
#oth            .22.211.21...21212111.2..221.12.3..1..313
hla2667         :IT:N:F:LS:::LIVGI::V:L::YAA:RY:G::E::G::
HVO_0563        :FR::K::E::::M:V::AV::V::M::::::Q:::::D:A
Hbo0967         :FT:S:::E::::::L::A:::::::::::::R::::::ES
rrnAC2347       ::::::::::::::I::L::::::::::::::::::::N:-
Hmu0449         ::::S:::::::::::::::::V:::I:::R::::::::::