Home |  Text search
5 genomes BUD1707 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0354

HVO_2449

Hbo2154

Hmu3168

-

hla1279

- -

Pairwise sequence scores
Consensus score1444 HVO_2449 rrnAC0354 Hmu3168 Hbo2154 hla1279
1136HVO_2449 1496 898 947 1000 926
1083rrnAC0354 898 1449 1012 901 926
1151Hmu3168 947 1012 1432 970 982
1186Hbo2154 1000 901 970 1533 1024
1128hla1279 926 926 982 1024 1454

194 symbols
consensus       MTD-------DADAYADELRANREEKDDFFGEHPQSPIPPEERDDFDGLDYFDPDPDYRV
#oth            132211112223121232.212.3...3..31.1.......1.12.3..1..1.1.11..
HVO_2449        :::D::::AF:::::VS::::K:::::::::S::::::::::::::::::::::::::::
rrnAC0354       :DE::::::::TEDWETQ:Q:::D:::R::S::R:::::::::::::::S::::::::::
Hmu3168         :S::::::::VP:GW::::::S:::::A::D::R::::::::::::E:::::::::T:::
Hbo2154         :::SDAAANV:::::::::ARK:A:::::::S:::::::::H::E:S:::::::N::A::
hla1279         ---:::::::MS:D::ER:::::R:::E::A::::::::::H:EG:A:::::E:N:::::

consensus       EATVTVHDDPEPVEMETSADREVRYLRVVTFSFELRGESRELAGYRQEADDS-AIFVPFR
#oth            2.1.11122..1.211.12222...1121.13.12213342.2111.23113311.....
HVO_2449        T:S:ET:A:::::T:D::T:G:::::::A::H::::DTDLT:GA::::H:::PTL:::::
rrnAC0354       :::::::ET::S:DL:::D::T::::H:A:L::D:D::::D:HAF::A::E:RTL:::::
Hmu3168         T:::::A:A:::::::::DG:T:::R:::::D::ID:AAY:::::::D:::-::::::::
Hbo2154         S::::::::::::T:::T:GN::::::L:::::::::::V::H::Q::RE:DN:::::::
hla1279         :::::::::::::::::T:SNP:::::I:::A::VG:DEHT:::::::G::G::::::::

consensus       DKTTGQQTYRGGRYMELEPDGELADGDEVVLDFNLAYSPFCAYSETFSCPLPPEENWLET
#oth            .......1.41...1..2.133.21112112......3....1111.1......2...12
HVO_2449        :::::::::N:::::::T::AP:DELE:::V::::::N::::FT:A:E::::::::::DV
rrnAC0354       :::::::S:D::::::::::RD:S::::IT::::::::::::::D:::::::::S:::::
Hmu3168         :::::::::S::::::::::ET::::::::::::::::::::::::::::::::A:::D:
Hbo2154         :::::::S::N:::L::H:E::::::ES:::::::::T::::::D::::::::::::::V
hla1279         :::::::::HN::::::::::::::::A:TI::::::C:::::::::::::::::::::I

consensus       AVPAGERDY-----
#oth            213...12332211
HVO_2449        V::::::::E::::
rrnAC0354       ::T::::TD:::::
Hmu3168         TIE::::E::::::
Hbo2154         ::A:::::WTPVNE
hla1279         V:::::KTPDIE::