|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 2328 | Hut2399 | VNG6389 | pNG6123 | HVO_A0448 | HVO_A0026 | hla2122 |
1475 | Hut2399 | 2379 | 1256 | 1339 | 1320 | 1344 | 1306 |
1589 | VNG6389 | 1256 | 2344 | 1336 | 1409 | 1431 | 1425 |
1762 | pNG6123 | 1339 | 1336 | 2336 | 1618 | 1663 | 1574 |
1957 | HVO_A0448 | 1320 | 1409 | 1618 | 2327 | 1783 | 1823 |
2015 | HVO_A0026 | 1344 | 1431 | 1663 | 1783 | 2366 | 1971 |
2010 | hla2122 | 1306 | 1425 | 1574 | 1823 | 1971 | 2344 |
314 symbols consensus ----MATRDIYETGFDEDV-TNSSTTPCPECDGRVRTNAVETVCEDCGLVIDEQRIDHGP #oth 1112.11122.222....123322122..1.3.2.1..12..1.1....112.12..1.. Hut2399 :::::::S:S:DHR::::::PSG:::G::D:G::::::SI:::::::::ILH:EP::::: VNG6389 :::::T:SEP::RA::::I:QRGT:E:::::G:P::::SA::::A::::I::::S::R:: pNG6123 MVRT:T:::::::::::::Q:E::A:Q::::::::T::::::I::::::::E:::::::: HVO_A0448 ::::::::H:::::::::::S:DG:::::::K:E::::S::::::::::::::::::::: HVO_A0026 :VRH::I::::Q:::::::R:E::ANQ::::N:::T:::::::::::::::::::::::: hla2122 :::::::::::::::::::Q:::::N:::::::::T:::I::I::::::::::::::::: consensus EWRAHDADQR--ERTGAPLTAARHDRGLSTEIGRGTDANGNELSGQKRRRLARMRREQSR #oth ..13313133111.......21.....1..1..222.13.13..14.111.2.1...11. Hut2399 :::SFED:RTNP::::::::PT:::::I::::::K::GK::D:::S:::Q:G:F:::H:: VNG6389 ::HRD:::TA::K:::::::P:::::::::V::S:Q::R:TA::SE:::::::::::::: pNG6123 ::::Y:::E:::::::::::T::::::I:::::H::::H::::::::::Q::::::::T: HVO_A0448 ::::::Q:::::K:::::::::::::::::::::WK:::::::::R::Q::S::::::T: HVO_A0026 ::::Y:KEEC::::::::::::::::::::::::::::K::::::K::::::::::::T: hla2122 :::T::Q:::::K::::::::::::::::::::::K:::::N:::::HQ::S:::::::: consensus GRFRSKAERNLAHGLGEVRRIASALELSNSVRDQACQLFRSAQNEDLLRGRSIEAIAAAS #oth 1.11.12....1...2.11.1211.2113111....1...1..3.2.12......11.1. Hut2399 A:::::S::::::::S::S::V:::DA:DVID::::D::::::G:::FH::::::M::G: VNG6389 ::W::TK::::G:::T:I:::::::G:AD:::::::::::T::::R::K::::::M:::: pNG6123 ::W:::::::::::::::::L:::::::E:I::::::::::::S::::::::::::G::: HVO_A0448 :::Q:::::::::::::::::::V::::G::::::::::::::T:::::::::::::::: HVO_A0026 ::W:::::::::::::::::L::::::::::::::::::::::::::::::::::::::: hla2122 :::Q:::::::::::::::::SG::::::::::::::::::::::N:::::::::::::: consensus VYGACRCNGLSRLLDDVSDAARVEQSRVTNAYKTLNEELGLPAPPVSPSQFVPRLASDLE #oth 1111....22121321.23211.433..2...22..21.1..14.2214411...1.2.2 Hut2399 ::A:::::R:PWTF:E::AVS::NKE::E:::RA::R:::::TV:P::Q:Y::::::E:G VNG6389 :F:::::::E:W:I:::APM:Q:G:N::E:::TV::::::::T::::LD::::::::::G pNG6123 I::T::::QHPL::E::V::::::SA::::::R:::R::E:::::MR:TS:I:::I:A:: HVO_A0448 I::::::::H:::::::V::::::::::A:::::::T:::::TQ::R::E:I:::::E:D HVO_A0026 :::::::::::::V::::EV:::AE::::::::::::A:::::E::L::M:::::::::: hla2122 :::::::::::::VGE::EM:::VE::::::::::::::::::K::::GK:::::::::: consensus CPDDIRRRARRLAEQAEERGITNGVHPAGFAAACLYKAGREEGAWLTQADVAEAAGVTPT #oth 23331.11.32.22111331313.23.1.1..1.1.3.23241232..322.2314.123 Hut2399 VSE:V::M:D::TK:::::::A::PN:::V::G:::H:VQKS::D:::QEI::V:::S:A VNG6389 :T:VV::::EE:VV::VDA:::T::::S::::::::M:ACVHD:P:::::A:A:::::VE pNG6123 LDH::::::NE:::R::GTTL:::CQ:S:V::::V:L:AQ:Q::LI::ST::S::E:SVV HVO_A0448 V:AY::Q::::::::S:SS:AAS::K:S:::::::::::::::R:::::E:::V:S::A: HVO_A0026 :::E::Q:::T:::::::::V:T::::::::::::::::::::R::::R::::SGD:::: hla2122 :::E::Q:::T:::::::S:L:A::::::::::::::::E:L:Y:V::S::::TGN:::: consensus TIRSHRDTLKEIV- #oth .2.21222143334 Hut2399 :L:QRWREI:GC-: VNG6389 :::::::R:LS::E pNG6123 :L::R::E:QA:-: HVO_A0448 :::::::::::LTG HVO_A0026 :V:T:HE::N:LAV hla2122 :V:T:HE::E:R:A