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5 genomes BUD1710 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3218

HVO_1230

Hbo0328

-

Hut0493

hla0806

- -

Pairwise sequence scores
Consensus score2791 rrnAC3218 Hut0493 HVO_1230 Hbo0328 hla0806
1320rrnAC3218 2730 1069 948 1090 1079
1750Hut0493 1069 2729 1137 1449 1502
1492HVO_1230 948 1137 2137 1314 1292
2273Hbo0328 1090 1449 1314 2837 2014
2231hla0806 1079 1502 1292 2014 2796

397 symbols
consensus       --MGSGLNDLLEGLSAIEATVGLLGVSVAAAVAIEFGVLRAARRYVRHTDSAYDDIVFSS
#oth            112434243233112242221322332333134422433142123243223431121333
rrnAC3218       MQL:::VV:::S::P:WQGFLV:V:SG::L:LV:RVLGD:LI::VTP:IEGDV:::::RG
Hut0493         :::Y:W::E:I::::LL::::LIV:G:F:V:FLF:V:LI:GI:VL::R:ETEL::V:LK:
HVO_1230        ::------------------:::-------------------------------------
Hbo0328         :::FAP:T:A:A::::::::::::L::LL::::L::V:::::::::V::::T:::::::E
hla0806         :::IPS:SA:F:::::V::::AV:V:::I:::GM::I:::V:::::ST:::::::::I::

consensus       LRAPLVVTAALAGVYALTQVPAVRDSTLLD-QLLDAVFGRPSLSLIVLVWAHAANRVVNR
#oth            22422221321313343313222243333232212222322211322321343321212.
rrnAC3218       IHTAVY::VG:G:A::GA:IYDI:PAIAVS:------LEAGT:::V:I::MVTLL:-IG:
Hut0493         ::W:V:I:IG:::IWGFS:T:-:ATE::::QAI:::::A::T::I::VA:TWSFH:::E:
HVO_1230        ------------------------------:-----------------------::L:::
Hbo0328         ::L::::::::T::LL:::::::::::VFSA:::RNF::::::::::::::Y::::::::
hla0806         :::::::::::::::V::::::::S:V:::P:::::::::::::V:I::::::::T::::

consensus       LVDAVNDRGARFD--FAPVFSNVWTLAVLVGGIGLLLWLWGIEITPLLGAAGIAGIAVGF
#oth            223223342422.1121.111...12222313222..31.2.111..112..11..11.1
rrnAC3218       QAS:IATDS:YI:RQMV:ILQ:::SALISG::VL:::V::D:DV::::AS:::M::I::L
Hut0493         GL:VLQSTDRH::::A:::::::::::MA:TA:::::TI:::::S::::::::::::I::
HVO_1230        :::::K:K:S:Y:::::::::::::IV:S::T::A::YI::::::::FAG::::::::::
Hbo0328         ::EE:::::G::::::::::::::::V::L::AAT:::::E:::::::::::V:::::::
hla0806         ::A:::EE:T:::::::::::::::::::I:SV:T:::::::::::::::::V:::::::

consensus       AAKDTVANFFGGIALYFDDTYKIGDFVVLDSGEAGSVVKVGIRSTTLLTRDELLVTVPNS
#oth            ..1..1.....111.11.1..121.21..11.22.2.21111...1111..221.....1
rrnAC3218       ::R::L:::::SLS::L:G::AV::::::E:::R:R:EDISV:::VIR:::DI:::::::
Hut0493         :::::::::::::::F::::::L::::::E::DS:::::I::::::::S::NVM::::::
HVO_1230        :::::::::::::::::::::::::Y:::::::::T::::::::::::::::::::::::
Hbo0328         ::::::::::::::::::::::L::CI:::D:TS:::::::::::::::::::M::::::
hla0806         :::::::::::::::::::::::S:YI:::D:T::T:I:::V::::::::::V::::::A

consensus       VLNAAKITNESAPQRRRRIRVPIGVAYGTDIDAFEALALEVAEAEDLVLDSPKPRMRFRR
#oth            3..11112...1.212..211.2..1....2.31.322313.22121.212.3..3.1.3
rrnAC3218       K::S:A:V:::T:R:K::::::V:::::::::KV:NIL::L:::::::Q:R:N::V:::E
Hut0493         M:::G:VV::::::S::::KI:::::::::L::::SAV:D::TGS:H:IGK:E::::::D
HVO_1230        :::::::I:::::N:C::LK::V::T::::V::::E:LTDI:LD:P::::::R::P::::
Hbo0328         ::::::::::::::::::::::L:::::::V:D:::::I::::::S::::::::::::::
hla0806         A:::::V:::::::S:::V:::::::::::::E:::::V:A:L::P:::::::::A:L:S

consensus       FGDSALEYELLCWVNGPTRRRRAQHELNRAIYKALRDADIEIPYPKRDVTVSTAAADADA
#oth            ..31..21.11...33.32121.2.3.112112223113.2..1.1.1132233332243
rrnAC3218       ::::::NF::::::SN:ALTA::T::::S::::RF:ADN:D::F:Q:SISI::EEIPGEL
Hut0493         ::E:::::::::::R::K:TG::R:Y:L:G:DA::::::::::::::::Q::DRSM::GG
HVO_1230        ::AD::::::V::::S:LK:GK:T:N:::E:::R:N::G:G::F:Q:::H:HS:D:E:TR
Hbo0328         ::S:::::::::::AA::::::::::::::L:M:VT::E:::::::::::F::::SEP::
hla0806         ::::::Q::I:::::::::::::::T::::L::T:SA::::::::::::::T--:::GS:

consensus       QDVASGRSDGGVR-D--T-EEAGRNGD-D--------
#oth            4232334334422323321331334113221111111
rrnAC3218       F:Q:QSK:KPT--:-::-:DDG:VT:E:-::::::::
Hut0493         EP:----------:-::-::::ATD:::-::::::::
HVO_1230        :SP:A:L:NS:::QPTRAR:T::DVA:A:EDDSAYDE
Hbo0328         GS:V:V:D::H::A:ET:RV::E:P::T:::::::::
hla0806         T:A:::QM:TPSST:DG::AA:T::::RGR:::::::