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5 genomes BUD1724 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0351

-

Hbo2286

Hmu1047

Hut0251

hla1077

- -

Pairwise sequence scores
Consensus score2760 Hut0251 Hmu1047 Hbo2286 rrnAC0351 hla1077
2077Hut0251 2883 1148 1687 1275 1688
1512Hmu1047 1148 2087 1237 1265 1238
2169Hbo2286 1687 1237 2975 1342 1885
1689rrnAC0351 1275 1265 1342 2139 1381
2174hla1077 1688 1238 1885 1381 2997

404 symbols
consensus       MAIARHETGPAAAVRALASQVHPVFMLPPLAASLFGALLA----GSFSPRVAALHAGAIF
#oth            .2211123.242222..2..1........1.3.11.212211111313342223.24.2.
Hut0251         :S::::RP:::::::::V:::::::::::V:V::T:S:::ARAT:::T:T:V:A::I:::
Hmu1047         :PL:TEGQ::VP::::::::I::::::::V::::::G:YG::::S:::V:L:::::V:V:
Hbo2286         :::S::G::ATN:AK::::::::::::::::S:::::A:::::::DI:FGP:FV:VL:M:
rrnAC0351       ::V:::::::F:T:S::::::::::::::::T::::G::S:::::G:W:P::V:::::M:
hla1077         :::::::H:LQ:DL:::L:::::::::::::::W:::AV::::::E:ALS:G:I:MT:::

consensus       FAVYTAHVKDGYVDFHVRGEDDDHPLTERGCRLALAGAGVGFAVCTAALALLVGPGAALL
#oth            2.1........1...22.1..11..1142..132.221221.23114322231122..21
Hut0251         A::::::::::::::F::S::E::::SVG:::I::::::TL:::ALTGV::TG::E::A:
Hmu1047         C:L::::::::::::YE::::EA:::::::::V:::LSTA::VAA:V::::::NLP::::
Hbo2286         :::::::::::L:::Y:::::::::M:K:::V:G:V::A:::LC:LGY:WAA::I:::VV
rrnAC0351       :::::::::::::::::::::::::::GA:::M::V:::::::L::::IW::::::::::
hla1077         ::::::::::::::::R::::::::M:I:::::S:LA:::::::::LT:GVF:::::::V

consensus       TLPTWAIGYLHAPQLDMNPVTATAGYPAGIALALLGGYYVQTTALTPTALGLAAVFLVLL
#oth            .1.1.41.13......11.111.4...2....112.1111121221134111.3.1.22.
Hut0251         :A::::L::F::::::T::::::G::::::::S:V:A:VAGAGTV:::V::::G:L:AV:
Hmu1047         :::G:L::FH:::::::H:L:::::::S::::::::::::::::::A:M:A:::::::V:
Hbo2286         :::::V::F::::::::::::::V:::V:::::IA:::::::G::S:EP:AF:S::::::
rrnAC0351       :::::I:::T::::::::::G::M:::::::::::::::A:V:T:::R:V:::::::L::
hla1077         :::::F::::::::::T::L:T:L:::S:::::::::F:::::EM:AAI::F:L::::T:

consensus       TGIKIIDDAQDYDYDRSIDKRTVAVVLGPRRARRLAEGLLAAGLVGV--LALTLDGIFPP
#oth            3.1.1...12.12..1..2....1.1..23...22.41.2411131112142122.21.1
Hut0251         L::::::::::LT:::::G::::::::::::::Q:::::::V::A::::AV:AAV:V::T
Hmu1047         S:::V::::T::::::::G::::::::::A::::V:Y::ML::M:A:VAA::::P::-::
Hbo2286         ::V:V::::K:::::A::::::::::::::::::F:HS:FW:::IA::::L::V::L:::
rrnAC0351       ::::::::E:::::::::Q:::::::::HQ:::Q::L::FGVA:L:IVG:SVA:P::-::
hla1077         A:V:::::E:::A::::::::::S:L::RP:::T::FS::M:::::::::WG:V::L:::

consensus       SAVAAALAFGAVALVARRAGPELATMLLIRGAYVFLAVLVAAVWFRPLTG--LPDIGVLG
#oth            2232.121.231.1221113.32..1..1..2.11..1.24.1.21.1313322112111
Hut0251         GT:L:VF::::::A:G:::E:R::::::V::::::::L:LI:L:Y::M::PLPV::::::
Hmu1047         :GGL::V::LG:::L::D:::::::K:::::S::::::::::::LG::--::--------
Hbo2286         F::V::::::L::::T:::::K::::::V::T:::::L::L:::::::::LS::::::::
rrnAC0351       ::A::::V:::::AI:Q:GD::T::::::::S:LL:::::T:::::::A-::--------
hla1077         ::P::::::API:::::::R:TI::::::::::::::::IV:::::::S:TP::::T:::

consensus       -YTYLATEV-FGALAL-LL-RA-ALRRAARTIAALYP-AYLWDWYTLEVGVFAI-LRTG-
#oth            311111112311121231132131222212112221131121111111211121321123
Hut0251         P::::::::A::::::T::V::E::T::::::VV:::L::V:::::::::::::E::::V
Hmu1047         :--------:------:--:--:--------------:----------------:----:
Hbo2286         R::::::::L:::I::A::L::N:V::::V::::I::V::::::::::::::::P:::SI
rrnAC0351       :--------:------:--:--:--------------:----------------:----:
hla1077         S:::::::IV:::::FG::RY:G:::QS:::::::::I::::::::::I:::E:TM:::Y

consensus       DLFGIPIEEHLFM-VVPALVLGIHETL-Q-R-------------
#oth            21221121111113121121212112232323333222221211
Hut0251         ::LA:::::::::L:::::::::::::T:R:SRQK:::::::::
Hmu1047         -------------:-------------:-:-:::::::::::::
Hbo2286         E:::::L::::::V:I::F:I:M::M:G:V:DDETGRANTDD::
rrnAC0351       -------------:-------------:-:-:::::::::::::
hla1077         :::::::::::::I::::::::::::IRTLSAESDDASRSDTHR