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5 genomes BUD1735 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2812

rrnB0215

HVO_A0513

Hbo3892

Hmu3125

- -

NP1402A

-

Pairwise sequence scores
Consensus score987 NP1402A rrnAC2812 Hmu3125 rrnB0215 HVO_A0513 Hbo3892
621NP1402A 1102 597 577 478 505 504
645rrnAC2812 597 1126 681 490 514 467
737Hmu3125 577 681 1152 530 586 562
746rrnB0215 478 490 530 970 760 748
808HVO_A0513 505 514 586 760 951 875
784Hbo3892 504 467 562 748 875 1168

184 symbols
consensus       ----------------------------MDIEAMFESMPFADLLGIEVTEVADGHAEGRL
#oth            1111111111111111111111111122.22331.241..243.12.212111.2.2.22
NP1402A         ::::::::::::::::::::::::::::::VTD::SE:::N:H:::::::A:::R:V:H:
rrnAC2812       :::::::::::::::::::::::::::::SLKS::NDI::VKQ::M:I:A:D::Y:A:E:
Hmu3125         :::::::::::::::::::::::::::::E:G::::RI:::AE::::FD:::::::::::
rrnB0215        ::::::::::::::::::::::::::MR:::::F::N:::::::D::I:T:DN:::::HI
HVO_A0513       ::::::::::::::::::::::::::::::::EF:::::::R:::V:::::::::::::V
Hbo3892         MQLAPMQLAPMQLGSTKRQRGLGERRET::V:EF:::::::Q:::V:::::::::::::I

consensus       ELREEHSSNPDRIMAHGGVTFTLADTVGGAALVSEVDQPVPTIDMRIDYLAAATGD-LRA
#oth            112211.1.33232.....112.1.......11.423212..1.......311.111.21
NP1402A         ::GT::::::N:LV:::::AYA:::::::::VI:ANFTVT::::::::::SP:::GR:D:
rrnAC2812       P:KDG:::::ES:I::::::YS:V:::::::VI:QSGTVS::V::::::::P::A::::T
Hmu3125         P:::::::::G:QI:::::::S:::::::::V::KSESVS:::::::::::P::A:::::
rrnB0215        :M:::L:W:EEQ::::::::::::::::::::::L:::::::::::::::E:G:::::::
HVO_A0513       :M:::L:W:A::V:::::::::::::::::::::::::::::::::::::N:G:::::::
Hbo3892         :M:::L:W:S::V::::::A::::::::::::::::::::::::::::::N:G:::::Y:

consensus       EADVVRNGGDVGAVDVEVYATDDHH-VASARGVYKTGG------W--G-D----------
#oth            1.1.1.4.21.32.121.112113211.3...1...113322221231312333332222
NP1402A         ::E:::::DS:A:::I::TDESGTT:::T:::T:::::GNGGSA:HS:D:EYTNGK::::
rrnAC2812       ::E:I::::S:SV::A:::D::G:::I:::::T:::D:DRGESP:TA:V:ESDVAHLTDD
Hmu3125         V:::::A:ES:T:::I:::DA:::::::::::::::::QGEETP:TD:T:VEPASDGAEQ
rrnB0215        ::::::H:::::V:S:::::E::TQ:::D::::::::-::::::-::-:-::::::::::
HVO_A0513       ::::::L:::::T:::D:::::GN::::T::::::::-::::::-::-:-::::::::::
Hbo3892         ::::::V:::::T:::D::::::DTL::Q::::::::-::::::-::-:-::::::::::

consensus       ----
#oth            1111
NP1402A         ::::
rrnAC2812       ::::
Hmu3125         RSEE
rrnB0215        ::::
HVO_A0513       ::::
Hbo3892         ::::