5 genomes BUD1745 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG5038 VNG6036 VNG6434 pNG1019 rrnAC2643 rrnB0170 - - Hmu1440 Hut2261 - NP3852A -

Pairwise sequence scores
Consensus score	414	rrnAC2643	NP3852A	Hmu1440	Hut2261	VNG6434	VNG5038	VNG6036	pNG1019	rrnB0170
140	rrnAC2643	465	132	127	150	105	100	100	119	130
191	NP3852A	132	400	178	161	164	159	159	176	167
181	Hmu1440	127	178	407	162	150	150	150	173	171
206	Hut2261	150	161	162	462	146	163	163	203	191
307	VNG6434	105	164	150	146	407	264	264	287	293
327	VNG5038	100	159	150	163	264	405	405	304	275
327	VNG6036	100	159	150	163	264	405	405	304	275
379	pNG1019	119	176	173	203	287	304	304	421	380
354	rrnB0170	130	167	171	191	293	275	275	380	425

63 symbols
consensus       --MNDDTST----LGRCPDCGERITAAWLLVEYEKDDGTEGIWAECPTCEDVVAPE----
#oth            12364234411111.2.15.244135431212.2323153333.2.15.231.5.41111
rrnAC2643       :MWDS::E:VDPP::Q::A:DVT:P::N:VIA:DRAGDWPRML:A::D:G:A:N:V::::
NP3852A         :MSTTGP::::::::G::F::ADV:STNV:I:::V:-:QPAVF::::Q:RE::K::::::
Hmu1440         MSAVSSDH::::::::::::ETE:PLGLVII:::T:A:R:S-Y::::G:RE::H:I::::
Hut2261         :::HA::RP::::V::::R::TG::PERVIIR::RT::-:AMY:T::D:R:::R:HPAVE
VNG6434         :::PT:D:S::::::Q:SE::D::A::::::::S:::::D:V:::::A::A:::::::::
VNG5038         ::::G:A:I:::::::::::::::SE::::::::::::ET::::::S:::G::S:K::::
VNG6036         ::::G:A:I:::::::::::::::SE::::::::::::ET::::::S:::G::S:K::::
pNG1019         :::S:::QR::::::::::::::::TP:::::::::::::::::::::::::::::::::
rrnB0170        :::P:::QS:::::::::N:D::::TP::::::::::::::::::::M::::::::::::

consensus       ---
#oth            111
rrnAC2643       :::
NP3852A         :::
Hmu1440         :::
Hut2261         STA
VNG6434         :::
VNG5038         :::
VNG6036         :::
pNG1019         :::
rrnB0170        :::