|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 1847 | NP3044A | hla1199 | rrnAC3265 | hla2086 | HVO_1886 | Hbo1767 |
1370 | NP3044A | 2095 | 1192 | 1162 | 1150 | 1116 | 1023 |
1475 | hla1199 | 1192 | 1840 | 1342 | 1381 | 1032 | 1063 |
1494 | rrnAC3265 | 1162 | 1342 | 1880 | 1419 | 1029 | 1017 |
1494 | hla2086 | 1150 | 1381 | 1419 | 1866 | 1080 | 1002 |
1273 | HVO_1886 | 1116 | 1032 | 1029 | 1080 | 2148 | 1211 |
1234 | Hbo1767 | 1023 | 1063 | 1017 | 1002 | 1211 | 2045 |
288 symbols consensus ----------------------------------MLAATGVSHGFGDEAVLEDLSLAVDP #oth 12323233222333332323322222212222232.2133232311134.1322123112 NP3044A MTLLSTLRGISSPARQQPGTQSESRRGGDTLAERG::VA::::::DGT::::SVT::::R hla1199 ::::::::::::::::::::::::::::::::::::R:::::QS::G:R:FD:::IEI:A rrnAC3265 ::::::::::::::::::::::::::::::::::::DV:A:::AY::DY:FR:::IGIE: hla2086 ::::::::::::::::::::::::::::::::::::R::DIARTY:::N:::Q::VT::A HVO_1886 MTTERPDAGDSGSEKPDETAAPDPAANGARRSKTR:::RSLG:::::G:::::I::::E: Hbo1767 :MSEMTGVVDGRTSEDDSTGG::::::::::::LR:::H::T:::DG:T:FS:V::::E: consensus GEVLAVIGPSGVGKTTLLRLLALFEEPDEGTVELDGTDVWAVDEAERLALRRRIGMVFQE #oth ..21111....2.....1.1..3232.22.1133212111433144..32...2..11.4 NP3044A ::TV:I:::::T::::::::::::S:::D::IG:::::::RQS:RQ:::A:::::::::K hla1199 ::::G::::::::::::::T:::SL:::A:::D:G:::A:T:E:SD:::::::V:::::: rrnAC3265 :::V::::::::::::::::::FSL::::::IGF:D:::::::::T::S::::::::::: hla2086 :::V:::::::::::::::T::::D::EA::::F::::A::::DD:::G::::::::::A HVO_1886 ::I:::V::::T:::::F::::M::R:::::::VG:D:::DLP::R:::V:::V::A::T Hbo1767 ::::::V::::S::::::::::CL:S:A::V:TAN:RN:GEMS:E:::HV:::L:::L:H consensus ASLFDATVARNVEYGLRVRRSWRARIR-AL-SLLGSAETADAVREALDVVGLADKMDQHA #oth 12..112.32.13...11.22.42.224234242143223321311.32..13124422. NP3044A :N:::T::R:::R:::S::::::E:L::--::W::GRKRQES:F::::I:::::AAS:S: hla1199 ::::::S:G::::::::::SP:AD::A:--:AT::L:::P:::::S::::::T::TT::: rrnAC3265 ::::::P::::::::::I::::T::LQRE:Q:IVR:NG::A::H:::G::::TE:::::: hla2086 ::::::S::::::::::I:::::D:V:SE:H::VR:NG:::::::S:::::M::E:AA:: HVO_1886 R:::ST::EE::S:::::::::S::V:D:VEG:F:RD:PSET::D::RT::MF::VGRD: Hbo1767 RC::S::::S:AA::::::AT:NE:::A:IRGF::T:::PL:AVD::ET::MV::Q:R:: consensus DSLSGGEAQRVAFARALAYDPDVLLLDEPTSDLDPRNTAVIEDAIAEARDRGIGVVVATH #oth 3...1......11.....11..2..1.....1.......21.3.232.14..21.21... NP3044A S:::::::::::::::::::::F:::::::::::::::::::E:VDA::S::L::A:::: hla1199 :::::::::::S::::::::::::::::::::::::::::::E::D::QT:::::::::: rrnAC3265 :::::::::::S::::::::::L::::::::::::::::::::::::::N:::::::::: hla2086 G::::::::::S:::::::::::::::::::::::::::::::::::::E:::::::::: HVO_1886 G:::A:::::::I:::::P::::::::::::N:::::::A::S:MRA::::::A:AL::: Hbo1767 A:::::::::::I:::::PE:::::F:::::N:::::::IV:K::CD:::::M::CL::: consensus DMHQAERVADRVAVLLDGQIIEVGPTERIFENPSDDRTRKFISGELVY #oth ..1..2.11..21.1.22421.41..231.23.1.4.221.12.1... NP3044A :::::R:I:::IV::::::V::A:::::V:SD:D:A:A::::N::::: hla1199 :::::::::::::::::DG:T::::::::::::::E:::::::::::: rrnAC3265 :::::::::::::::::E::T:IA:::V::Q::::H::Q::::::::: hla2086 ::::::::::::::::ADS:T::A::DV::Q:::::::KQ:::::::: HVO_1886 ::Q::R::S::T::I:G:TC::S:::DAV::S:D:::V:Q:VE:K::: Hbo1767 ::Q::Q::S::T::::G:E:::C:::GQV::E:::R:::::VE:::::