|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 3212 | NP1714A | hla2349 | Hmu1022 | pNG5128 | Hbo1514 | hla0716 |
2407 | NP1714A | 3252 | 1957 | 2309 | 2345 | 2369 | 2347 |
2459 | hla2349 | 1957 | 2831 | 2360 | 2379 | 2404 | 2356 |
3046 | Hmu1022 | 2309 | 2360 | 3221 | 2967 | 2959 | 2957 |
3109 | pNG5128 | 2345 | 2379 | 2967 | 3216 | 3050 | 3004 |
3125 | Hbo1514 | 2369 | 2404 | 2959 | 3050 | 3206 | 2994 |
3077 | hla0716 | 2347 | 2356 | 2957 | 3004 | 2994 | 3201 |
438 symbols consensus MYYAYKYRLKPSDAHREELDRHRDICRQLYNHTLYRLNEYQDEHGELPS-MTTLRSELPD #oth 12.2111112.2123223112112211111112121222222222222212222121111 NP1714A :N:N:R:::::TESQC:T::Y:::T:::::::A:::FSQIPESE:TVKQRVR:I:D:::: hla2349 VL:TGR----:E:------------------------------------:---------- Hmu1022 :::::::::::::::::::::::N:::::::::::::::::::::::::::::::::::: pNG5128 :::::::::N::::::D::::::::::::::::::::::::::::::::::::::::::: Hbo1514 ::::::::::::::N:::::::::::::::::::::::::::::R:::::::S::::::: hla0716 :::::::::::::::::A::::::::::::::::N::::::::::::::::::::::::: consensus LKKWWDDLSDVYSKVLQTVVERLFDNLKGLSKLKENGYGVGQLKWKPPREFRSFTYSQSG #oth 1131113131211111.11.1.111.111.12..11.12..1.1..1..1...1..1... NP1714A ::D:::A:T:I::::::PT:M:IAK:I:A:GQ:::Q::K::E:R::S:::::::::N::: hla2349 ------------TDLI:::::::::::N:::::::::::::::::::::K:::::::::: Hmu1022 ::::::::N:::::::::::::::::::::::::K::::::::::::::::::::::::: pNG5128 ::::::G::::::::::::::::::::::::::::::::::::::::::::::L:::::: Hbo1514 ::E:::::::::::::::::::::::::::::::::::S::::::::::::::::::::: hla0716 ::::::G::::::::::::::::::::::::A::K::H:::::::::::::::::::::: consensus FKLDKKGGQTVLSLSKLADIPIRLHRAIPDDATLKQVTVKKEPTGEWFATFGVQMDREPP #oth .1....................1...11.1.112....1...211....1..111.1... NP1714A :E::::::::::::::::::::E:::PL:::::V::::L:::KA:::::I::ME::A::: hla2349 :::::::::::::::::::::::::::L:::T::::::::::::::::::::::I::::: Hmu1022 :::::::::::::::::::::::::::::N:::::::::::::::::::::::E:::::: pNG5128 ::::::::::::::::::::::::::::::::KP::::L::::::::::::::::::::: Hbo1514 ::::::::::::::::::::::::::::::::K:::::::::Q:D::::::::::::::: hla0716 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus EPPE----NPEKCVGIDVGILKYAHDTDGTAVGSLDLSDERDRLEREQRKLSRKQHGSNN #oth 22.11111.1121....1..1........1..1....121.2..........1.1....1 NP1714A AK:PLEDI:IDEM:::::::::::::::::::E:::::E:::::::::::::::E::::: hla2349 :T:::::::::T:::::E::::::::::::::::::::V::::::::::::::::::::: Hmu1022 ::::::::::::::::::::C::::::::::::::::T:::E::::::::::Q::::::S pNG5128 Q::::::::::::::::::::::::::::::::::::::::K:::::::::::::::::: Hbo1514 :::::::::::::::::::::::::::::A:::::::::::::::::::::::::::::: hla0716 :::::::::::::::::::::::::::::::::::::T:K:E:::::::::::::::::: consensus YEKQRRRVAECHADLRRKRRDFLHKLSAYYAREYDLVAVEDLNVKGMMESPSNSRNTASA #oth 1.1......11112111.1........1......1.......1..2.1...2........ NP1714A W:N:::::::::LQIK::Q::::::::N::::::E:::::::D::D:L:::R:::::::: hla2349 :::::::::KY::::::::::::::::::::::::::::::::::E:::::::::::::: Hmu1022 :::::::::KYY:::::::::::::::N:::::::::::::::::::::::::::::::: pNG5128 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1514 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0716 :::::::::::::N::Q::::::::::::::::::::::::::::::::::A:::::::: consensus AWRTFLSLLEYKCEREGTHFVAVNPRGTTKECASCGVSTEKPLWVREHSCPACGFEADRD #oth ..1..1111.1..1..11..11.2.2....1..1...1.1......1............. NP1714A ::N::TDM::A::::::::::E:E:E:::::::Q:::E:::::::::::::::::::::: hla2349 :::::::::::::K::R:::::::::::::::::::::::::::::G::::::::::::: Hmu1022 ::::::::::::::::::::::::::::::K::::::::::::::::::::::::::::: pNG5128 ::::::::V:::::::::::I::::G:::::::::::::D:::::::::::::::::::: Hbo1514 :::::::::::::::::::::::::::::::::::::::D:::::::::::::::::::: hla0716 :::::::::::::::::A:::::D:::::::::::::::::::::::::::::::::::: consensus ANAAWNILSRGLEDVGVGHSES-------------------TPVETALPVDTP-VSAKRV #oth 1.......11..312...11.11111111111111111111........1..211...1. NP1714A ::::::::F:::T:L::::::G:::::::::::::::::::::::::::T::HS:::::: hla2349 :::::::::G::::I:::::::PSSESRSDSDVRTRALLSS:::::::::::::::::H: Hmu1022 :::::::::::::N::::YF::::::::::::::::::::::::::::::::H:I::::: pNG5128 S:::::::::::::::::Y::::::::::::::::::::::::::::::::::::::::: Hbo1514 ::::::::::::Q::::::::::::::::::::::::::::::::::::::::::::::: hla0716 ::::::::::::G:::::::::::::::::::::::::::::::::::::::A::::::: consensus VEAGSPTLKERTASAVSE #oth 1.2.....2..2311121 NP1714A ::::::::S::VSASRVG hla2349 ::T:::::E:::T::::: Hmu1022 ::S:::::::::V:::C: pNG5128 :::::::::::::::::: Hbo1514 :::::::::::::::::: hla0716 L::::::::::A::::::