5 genomes BUD1793 5 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC3359 - Hbo2055 Hmu2233 - hla1553 NP4508A -

Pairwise sequence scores
Consensus score	562	hla1553	Hbo2055	NP4508A	rrnAC3359	Hmu2233
276	hla1553	544	204	244	212	258
305	Hbo2055	204	621	292	231	255
472	NP4508A	244	292	635	346	414
409	rrnAC3359	212	231	346	572	373
469	Hmu2233	258	255	414	373	582

107 symbols
consensus       ---------MAARRGEFERIRTVLEAADPDEPLTAREILDLLDEHGES------------
#oth            1111111122242422232123..12..2221.....11321322213111111111111
hla1553         ::::::::MS::EYDRYDW::G::A:::--K::::::::A:AGKCE:-::::::::::::
Hbo2055         :::::::::-------------::::::--:::::::V:RR:KQP:D:RQSRDGCRTHRH
NP4508A         MVVGAIRTT:RI::::::::::::AE::::::::::::::::::::::::::::::::::
rrnAC3359       :::::::::::M:E:::G::L::::E::VNGT::::::C:::E::D:A::::::::::::
Hmu2233         ::::::::::RT:H:::::::S:::D:::::::::::::QV::::::E::::::::::::

consensus       ---------FDSAHRVATVLGRRADA-GEVEVIQGQPYRYRLADR-N
#oth            1111111111211..1......3.231.11..2312..1.1242232
hla1553         :::::::::I::P::I::::::W:ER:::::::ADR::::::EA-:-
Hbo2055         SEPRGDDDT:ET::::::::::A:::D:P:::TR:S::T:::R:-:-
NP4508A         ::::::::::::::::::::::E:::::PI::VD::::::::GEEAR
rrnAC3359       ::::::::::G:::::::::::::QS:::::::::::::::VP::D:
Hmu2233         ::::::::::::::::::::::::QT::::::::D:::::QF:::N: