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5 genomes BUD1798 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3315

- -

Hmu2666

Hmu2668

Hut1980

hla1332

NP4332A

-

Pairwise sequence scores
Consensus score2209 NP4332A Hut1980 rrnAC3315 hla1332 Hmu2666 Hmu2668
862NP4332A 2351 478 448 455 473 487
914Hut1980 478 2269 479 488 654 667
1318rrnAC3315 448 479 2144 1536 745 653
1351hla1332 455 488 1536 2157 735 590
1288Hmu2666 473 654 745 735 2288 1128
1216Hmu2668 487 667 653 590 1128 2258

323 symbols
consensus       ----MRRRRFLATGTAALALALAGCGHPS--GSLDMHEAPTATAIADRAARSTDPLPEER
#oth            111112..32.223223133211..33141313.31432332321.23325442423323
NP4332A         MMPSIS:::L:VG:A:::GS:::::PS:TPG:A:E::P::DG::V:EA:T::I::ERHR:
Hut1980         :::::H::SA:L:LLVL:LVG:S::SAA-:::::S::P::N::V:::H:TLN:SD:D::A
rrnAC3315       ::::::::Q:::G::VL:SA:V:::::::::VV:::DD:-:::D:::EVSI:P:SESA:Y
hla1332         ::::::::::::S:::F:SV:::::::::::VI::LN::-::DD:::EVSMTA::GS::Y
Hmu2666         ::::::::T::::AAT:V::P:::::::Y:D:::S:S:LTSDS:::E:Y:GE:EG::P::
Hmu2668         ::::::::S::::-:TT:::P::::MR:D:Y:::T:TAMA:DA:::R:H:EDL:A::PDS

consensus       E-ALVDAAIAGESATRRGRYPPFDADRPVRVDGAYYDVSETVIDSREVTRYELRIDFDPA
#oth            3121343.232341223233112332122342212.3134243323422314341231.3
NP4332A         :A:VL:::L:DTA:VITDER::LS:::::LYGATV::::V:EGPTDP:D::LAVV--S:S
Hut1980         H:R:AVG:VN:SGP:VTND::::TP:::IA:::T::N::WSA::::Q:PTFV:E:EK::T
rrnAC3315       T:-V:S:::ENG:::::::NEL::QIDI::I:ETF:E::::PLE:N:::V::V:::::::
hla1332         ::-::TS:LENG::::::::EL:EPTDT::::E:V:E:T::R:A:S:::V::VL::::::
Hmu2666         T:::I:::::::KP::E:::::YER::::EHE::::RIAHE:V:::TE:::TID::Y:::
Hmu2668         R::::RD::D::TPA:ADTG::::::::FED::::::IGYE:VER:AG:Q:D::::Y::V

consensus       DTTSDR--IAYEDLPAVDRRALADLI----PDADAPTGDGFDVGVGYG-YAAEVGSASVL
#oth            3324231111131..32.251.53242111254232432121324434123343343..1
NP4332A         TNGR:::::E::E::SI::I:::::KRHEVELG::AFDED:EMAFD:YW:DEAAL:::::
Hut1980         N::G:::::::Q::::::QH::P:--:::::GST:V::::-:IATLAV::NKTEQET:::
rrnAC3315       :S:AEIGE::::E::::::QR:DPI:::::S:DNP:S:::Y:::I::::T:::::DG::F
hla1332         :::PELGE::FD:::E:::ER:EPIV::::SET:P:QQ::Y:L::::::S:::::NE::F
Hmu2666         T:P:SV:::::::::DA:KT::GE::P::::M::H:DN::::::RTHR::DDV--:E:::
Hmu2668         AEP:SV::V::A::::::::::SR:LP::::P::S:::R::::D:ADT::LDD--T::::

consensus       VPEPRYDVIVHDGDAYRVAV-DSRTVTETTYRYEAERVADDPAALADQLRERYLFTLSGL
#oth            11113.14223223221131334424234412.1.133143334113222332111131.
NP4332A         ::D:E:::::-GTT:FNI:P:QAE:::L:DFE:S:TVRS:::::FG:R:AADATVVFE::
Hut1980         ::::::ELVEFEDRTV:IT:DGPSPK:IY:::::::Q::ANSDE::TR:ESTH:::::N:
rrnAC3315       :::RQ::I::::::R:::T::ST::T:::K:::::TEA:SGVDSF:::I:DQ:::::T::
hla1332         :::R::::L:::::R::::::::H:AS:AE:::::TE::P:VETF::HV::::::V:A::
Hmu2666         ASD:A:EG:S:::AT:::R:A:GGE::IE::E:S:::::ESATD:GA::::Q::::::::
Hmu2668         ::::E:EAVSY::T::::G:GG::EIEVDR:Q:S:::I::S::::GR:::::::::::::

consensus       SEAEREIVEEAIDGGYFQDG---DDAFRSLTDRIRAHDGIRVTDRY------GTWLVRYD
#oth            1221122131122231232342132.222141.2322211341354111111.21.22.1
NP4332A         :DD::AL::D:L:D:RTVV:LD:NE:YVA:GE:LL:::P:YE:N:Q:::::::E:::E::
Hut1980         :TPQQK:IND::GET:Y:EQE::S::WTR:LE:FD:A:PVYGD:ENDSGYVD:EY:::::
rrnAC3315       ::::::V::::::::::::-::::E::::V:::::E:E::E:::S:::::::::::LA:E
hla1332         :D::::V:::S:::A::E:-:::::::::VI:::::::::::D:F:::::::::::LE:E
Hmu2666         ::::::::A:::::S::P::GEVP::::::A::F:DRA::DT:EHG::::::::::A::E
Hmu2668         P:::::::L::AAE::YP:SP::SR::::::E:LG::EPV:S:AGT:::::::H::::::

consensus       GTVYWADLEWP-E----------
#oth            142.1232443434442111111
NP4332A         :EN::VV:DPVRISELRDRLGDG
Hut1980         :::::::IYGYTDGGA:::::::
rrnAC3315       QVE:LTYV::-:-::::::::::
hla1332         :AE:L:YV::-:-::::::::::
Hmu2666         :::::T::QY:P:ADSQ::::::
Hmu2668         :R::::E:ST:G:TTP:::::::