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5 genomes BUD1801 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0263

- -

Hmu1184

Hut1188

hla0895

NP3904A

-

Pairwise sequence scores
Consensus score1499 hla0895 NP3904A Hut1188 rrnAC0263 Hmu1184
750hla0895 1976 822 458 410 444
788NP3904A 822 1712 436 447 454
883Hut1188 458 436 1425 584 678
921rrnAC0263 410 447 584 1489 912
1016Hmu1184 444 454 678 912 1472

273 symbols
consensus       -----------------------------------MSRSERRRGDAPVD---------PD
#oth            111111111111111111111111111111111111123243431213222221111112
hla0895         MLRRSPAYFLNGSLDGRAMDGSGFDRSAGEGSRGSSD::GS:E:::AS:ASHD:::::::
NP3904A         ::::::::::::::::::::::::::::::::::::::D:DNTT:P:::GQPESQESL:N
Hut1188         :::::::::::::::::::::::::::::::::::::LFDGHDSE::--:::::::::--
rrnAC0263       :::::::::::::::::::::::::::::::::::::TQ:----:P:AE:::::::::::
Hmu1184         :::::::::::::::::::::::::::::::::::::::::::::S::E:::::::::--

consensus       -----PADPDIADLFAELDELEETVDSDEERAKVRRARRTAARVPDSGA--FGRVIWGFD
#oth            22222341323411323.221131.1123..23.14224324323233212122213112
hla0895         ASTHG:T::::N::L:K::A:SD:::G:H::E:::QTISLVE:M:G:A::::TTR:TKYT
NP3904A         GLDGST:EY::D:VYKQ:QLI::::T::A::EE:::::KMLK:::G:DH::----:NKYT
Hut1188         ::::::SE:SVV::V::::::::::::P::::::DVV:E::LS:SQQ:::::::::S:::
rrnAC0263       :::::RE:DEF:T::D::Q:::QL:::ED::RQ::D:M:A::DSQ:HEPAT::::V:::G
Hmu1184         :::::QD:A:MS:::DD:S:::SL:::P::::R::E:MQ::SE:D:D:P:V::::V::::

consensus       RADLAESLLGAVLFGIPMAVEGGTFEIGAWIAAH-----PLFLVATVIFTGALVAGILYV
#oth            22.22.121.211.11.12..1.12131432.3322121.31.32223234221411..1
hla0895         SR:M:::FV:::::SL:LL::::V:::AG:L:GTSVAGV:V::L:H:A:VLVMT::L::A
NP3904A         TR:MG::FV:G:V:SL:LL::D:V:::AE:F:E:TIAQV:I:::LN:L:I:V::T:L::A
Hut1188         :::AS:A:::S:::::::F:::::S:V::YL::N::::::H:::G:AG::F:::F:::::
rrnAC0263       :S::::A:::SL::::::::::::VDA:LH::Q::::::::Y:A::::IAIG::IS::::
Hmu1184         :::::::V:::L::::::::::::VDS:QF:::R:::::::::IL:L:A:V:V:V:::::

consensus       ADIQDVRVANPIFGFIPRRLVGVLGISLVTAVALLTMWGRLHWA-DPA--IEAFCRCAVA
#oth            1121212134221.21.1.21..13312311232133..2131411.2314243232312
hla0895         ::FRQIEIRH::L:V::::YA:::LV::F:SAFM:LL:::::EG:::TG:P:RGA:VL:V
NP3904A         I:VREITITK::::::::::::::A:::IV::GSMF::::::EE::::T:::Q:G:VT:I
Hut1188         :E::::::VD:Y:::::Q:FA:::V:AS:::LI:M::::::T:D:T:-::LV:VGEL:A:
rrnAC0263       ::F:::::::R:L:VV:::::::T:TA::VS:::::G::LVE:ST:::VVY:SA:I::::
Hmu1184         :::::::::YAF::LV:::::::::S:FA::::::SV::VVD:::::-::WLD::V:V::

consensus       FAPMAIGAALGDILPGE----------------
#oth            232113.12.1.....21211112121212111
hla0895         W:VA:F::G::::::::SQGEDIGEIDLDFDD:
NP3904A         W:AA:L::V:A::::::SKGEDISEM:IDGDDK
Hut1188         IL::SV:G::::::::S::::::::::::::::
rrnAC0263       :V::::::::::::::N::::::::::::::::
Hmu1184         :F::::::::::::::S::::::::::::::::