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5 genomes BUD1807 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2753

HVO_0101

Hbo1393

Hbo2903

Hmu0698

- - -

HQ1473A

Pairwise sequence scores
Consensus score1550 HQ1473A Hmu0698 rrnAC2753 Hbo2903 HVO_0101 Hbo1393
897HQ1473A 1703 758 732 771 694 664
1035Hmu0698 758 1552 829 836 844 809
1148rrnAC2753 732 829 1695 1025 840 814
1170Hbo2903 771 836 1025 1603 861 855
1102HVO_0101 694 844 840 861 1585 942
1052Hbo1393 664 809 814 855 942 1542

234 symbols
consensus       ----------------------MFTDREDAGRRLAEALRERDVDADIVLAIPRGGLPVGR
#oth            11222222222222333333232.41.33..31.12214233232111.........2..
HQ1473A         MCPSRSDSYRYLIYIPFMAKSNQ:E::V:::EQ::A::HTYEI::::T:::::::::L::
Hmu0698         ::::::::::::::::::::::::R::T::::Q::::MAD:G:SPEL::::::::::P::
rrnAC2753       ::MRKYLHLDSELTSMGRNRSPT:KN:QA::Q::G:::::::ITV:::::::::::::::
Hbo2903         ::::::::::::::MVRDRQPSQ:::::S::KQ:GD::::EG:::::::::::::::L::
HVO_0101        ::::::::::::::::::::::::A::::::::::DL:D:::ET::L:::::::::::::
Hbo1393         :::::::::::::::::::::::::N:TE::K::::R:Q:AA:NP:L:::::::::::::

consensus       AVADALDAPLDIVVAKKIGAPNNPELAIGAVAADGSVWLNDDLIEQRGIGRDYIERERAR
#oth            4..13242..112112.21..3.1.2.21..131.22.2.232232322423.3233132
HQ1473A         V::NTVST::::I:::::A::R:T:Y::::::S:::::R::TA:Q:T:ASET:F:Q:Q:A
Hmu0698         ::::HF::::GV:::::L:::::::::LA:::E:::::R::E:LARLDVTDE:VDA::V:
rrnAC2753       P:::::::::::A::::::::::::Y:::::::::A::::T:V::::E:P:::VAST::E
Hbo2903         M:::::H::::::ATQ:::::::::F::::::::::A:::EEV::R:::D:E::::I:SE
HVO_0101        E:::R:R::::V:::S:V:::D:::::V::::G:::A:W:E::LSYLDV:E::LD:::E:
Hbo1393         ::::::GV:::V:::S:V:::G:::::::::TGE:DL::::S:V::F:::DR:::SQ:E:

consensus       EADAAREKAERYRDGDPLPDLSGKRVVIVDDGVATGATARACLARVRAAGPERVVLAVPV
#oth            3134.121143..33433.213322.32....2.....22..151133242212321...
HQ1473A         I:KQ:NQ::I:::EN:DF:::TNSH:I:::::A:::::IQ:::D::GKINTTS:TV::::
Hmu0698         VG:E:::T:::::::-AF:S:RDR::A:::::I:::::M::::::::::E:ASIAVG:::
rrnAC2753       M:E:::Q::Q:::SSESS:T:T::::CL::::::::::::::IEQI:Q:D:::L::::::
Hbo2903         ::EN::::::T:::DGS:::::::T::V:::::::::::::::S::N::A::::IF::::
HVO_0101        ::A:::D:VSL::G::::::VAE::::V:::::::::::::::RQ:V:G:A:::::::::
Hbo1393         :::V::::VRA::G:K:V::V::::::::::::::::::L:::QQ::SG:AA:I:F::::

consensus       APPRTISDLEALADEVVCLETPEAFRAVGQFYRDFGQVSDEEAMSYLADE----
#oth            11131333.2332.4.12124.33.311.22.24.2..1.11.24.13322111
HQ1473A         :::D:VKM::QS::S:I::N::QQ::G:::::QT:E::::A::::::---::::
Hmu0698         G:AD::D::G:S::T:::V:::A::::F:AY::N::::::::::G:::S:::::
rrnAC2753       :S::AM::::::V:::::::R:S:::::::Y:EQ:E:::::A::::::E:::::
Hbo2903         GS::A:::::G::::::::SA:SV:H::::::ER::::T:::::A:I:E:::::
HVO_0101        G::N:L:E:::EC:A::AV:S::::G:::A:::::A:::::::AT::R:GAGEH
Hbo1393         :SAA::PR:REV::D::VV:V::T:A:::YH:::::::T::::LE::D::V:::