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5 genomes BUD1811 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1220

HVO_1259

Hbo0289

Hmu2506

- - -

HQ1752A

Pairwise sequence scores
Consensus score1499 Hbo0289 rrnAC1220 Hmu2506 HVO_1259 HQ1752A
647Hbo0289 1412 391 452 542 444
1092rrnAC1220 391 1479 1156 501 560
1129Hmu2506 452 1156 1584 576 566
820HVO_1259 542 501 576 1489 635
791HQ1752A 444 560 566 635 1459

221 symbols
consensus       MSAIGRSINLGLVAIVVLLMAGTGGATMLYQDSASDLRSQNQQLRQRNAELRENLDDARN
#oth            213211321221133231332.1211.22..3.123.22..31.122.23.122.33214
Hbo0289         ::F:::P:::A:::V:A::LT::V::::M::S:::::ET::D:::E::KN::AE:ES::T
rrnAC1220       -------------------:V::::T:V::::::::::::::E:::Q::::::::::T::
Hmu2506         V:::::RL::::::L:::S:V:::AT:V:::::::E::::::E:::E::::::::::TSG
HVO_1259        :::L:::L:::::V:::::T::AV::::F::Y:VDS:DQ::E:::E:::A:E:::SQS:Q
HQ1752A         ::I::::::I:::L:LC:TI:::A:::LF::E:VEG:DT::S::QSQ:EQ::ND:NE::S

consensus       DLESTRERVDELNDSLETRRGDVDQVATNLNQTEAQLNATQSELAETRQSLRESEDRLEE
#oth            2.332122231.132.12222..21.132.23..41.13.131.23.122.223132212
Hbo0289         E:KVL::::ND::Q::QQTQ:::GH::AE:ES::KL::H::A::ER:ET::E:KREQ::S
rrnAC1220       :::::QT:::::E:Q::::SE:::::::::::::E:::::E:Q:::::::::D::::V::
Hmu2506         E:D::QA:::::EAR::::SK::::::::::R::::::::E:Q::::::::::::::V::
HVO_1259        N:SA::TELR:::::::RT::::S::SDS:ED::S::SS::N::SS::DE:Q:T:SN::D
HQ1752A         :::KA::QMQ:::K::::A::::S::SG::Q:::Q::SE::T:::N:E:D:QAA:R:ANS

consensus       LEGTVDELRSKRDNLQNEVDDLESQIDDLETENEE--------------LQADIDDLESQ
#oth            21232331233324.242223.122221.2211221211121111111113343331133
Hbo0289         VRDNL::A:::IEE:EKKNKT::E:VAE:K:::K:::::::::::::::-----------
rrnAC1220       ::::::D:QDE::T::::::::::T:::::S:::DLEDERAELEDQVSD::D:::S:::R
Hmu2506         :::::GY::N:::S::T:::E:::TVE::::::::LADERDELEDQVSD:::E:E:::::
HVO_1259        ARSRIS::TATL:D:EEQRNR::N:::::::D::::::::::::::::::E:TN:R::N:
HQ1752A         ::SE:QN:Q:VNQ::RG:::::Q:EAE::RN:VSS:::::::::::::::KGQVS:::GE

consensus       ISSLESEVDRLENRNDELRDDIRTACAQP-ENNNKATCEDY
#oth            232.231232.113222.1322232.223212242331333
Hbo0289         ---:SE:::D:RDDR:D:QR:L:EV:DDWS:EA:SPPPPEC
rrnAC1220       ::T::DDIEE:::Q:Q::::::E:L:S:::::QE:::::G:
Hmu2506         :TT::T::AE:::::R::::::E:L:D:::D:QD:T:::::
HVO_1259        :D::Q:::S:::D:V::::AEL:Q:::GYQDG:QP:V:S:V
HQ1752A         V::::::N:::::E::L::SRVDR::::I::G:KPSF:---