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5 genomes BUD1812 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1218

HVO_1261

Hbo0287

Hmu2504

- - -

HQ1754A

Pairwise sequence scores
Consensus score4403 HQ1754A rrnAC1218 Hmu2504 Hbo0287 HVO_1261
2807HQ1754A 4378 2251 2234 2372 2183
3535rrnAC1218 2251 4472 3909 2432 2451
3544Hmu2504 2234 3909 4414 2449 2396
3081Hbo0287 2372 2432 2449 4391 2572
3023HVO_1261 2183 2451 2396 2572 4385

609 symbols
consensus       ---------MVLSDVFLAPLGLAALLAAVPILILYLIRPDPRRLTLPTFRFLVADERQQA
#oth            111111111.1.1111.2.1.22..1221.121..121.1.21321..221.32232232
HQ1754A         :::::::::::::::::::I:IM::A:LI::::::F:Q:::::VE:::VEL:FE:TQ:D:
rrnAC1218       MPPPPDTST::::::L::::::::::LT:::VV::::::::QE::::::Q::::G::::S
Hmu2504         :::::::::::::::L::::::::::L::::VV:::V::::QE:::::::::::G::::S
Hbo0287         ::::::::::A::::::T:::F:::A::I:::::::V::::::IQF::YQ::TE:Q:ENE
HVO_1261        ::::::::::A:TEF::F::::V:::G:::LI::::L::E:V:R::::::::ADAAGRS:

consensus       SNPFFERIKRSLLLLLQLLVVLLLAVGLATPYVSVSESATVEETVLVVDTSASMQVRADG
#oth            12.311.12111..11.211222.122111..1212112..3..12.1.2....214311
HQ1754A         :R:L:D:::QN::::::I:::I::::SI:G::I::A::Q::S::I::I:G::::::NTGD
rrnAC1218       AT::L:::S::::::::V::::V::::::::::T:::R:::A:::I:::::::::TD:::
Hmu2504         :T::L:::S:::::V::V::::V::::::::::T:::R:::::::V:::::::::TE:::
Hbo0287         :::V:::L:::T::::::::I::::TA:S:::::T:Q:E::::::::::A::::N:QS::
HVO_1261        :::I:D:LL::::::I::VALVA:VGS::::::L:P::E::Q::::::::::::G::DG:

consensus       GTRFQRAVAAARDAVTGTTSVVTAGAGGEVVLRRGTATDARATLAGLSPTDAPGDLRGAI
#oth            2...33.211.12211111.113113333.2.11.31231242.21.311....3.32.1
HQ1754A         ::::TA:I::::ETTSS:N::IF::STSS::::S:G:SEVQT:::E:R::::::N:NA::
rrnAC1218       Q::::Q:::::::E:::::::::TTN::::::Q:::P:A:QG::D:::::::::A:S:::
Hmu2504         E:::::::::::G::::S:::::TTD::::L:Q:::P:T::E:::::D::::::T:G::V
Hbo0287         ::::S:::SE:Q::::::::I:V:::EPR:E::S:P:D::KSV:T::::::::::::S::
HVO_1261        ::::DS:L:::::E:S::::::A:::SAD::::::S::::::A:D::QAS:::::::S::

consensus       SQAASIAGENARIVVLSDFAGDE-WRDAVRTARARGLSVDLQQFDGGGAGNVGIVDRRFS
#oth            13.112...22.11.2...11122.22..23.11..12.2.1..21..21...122.1.1
HQ1754A         :R:TA::::::::A:F::::::R:::Q::QS:Q:::VQ:S:::::R:::-::::TA:S::
rrnAC1218       :::::L::::::V::::::::E:::TT::T:::G::::::::::::::D::::FI:::::
Hmu2504         :::::L::::G::::::::S:E:::TT::T:::G:::::::R:::R::G::::F:::::T
Hbo0287         :T:::::::GS::::V::::D:SA::::::V::::::::E:R::N::::::::::S:S::
HVO_1261        TA:::V:::D::V:::::::D:SP:S::::E::::::V:E::::A:::::::::::::::

consensus       GSNVTLSVKNYGDSTVTRTVRLGGAQRELQLGPGDVGSVTLPVPAGGGRARLSPGDDFPT
#oth            122..1121.1112311.112.1322321312.11.321.211..1.1213.2.1.2111
HQ1754A         R:::::TIQ:FA:RE:R:::T::RS:IS:T:T::G:QR::::::::::::Q:T:S::LSI
rrnAC1218       ::A::::::::::::::::::::N:RQ::::::D:::::::::::S:SE:::::::S:::
Hmu2504         ::E::::::::::::::::::::D:::D:::::D::::::M::::::SE:::G:::S:::
Hbo0287         :TE::V:L::::NDS:::S:S:::T:KS:S::::::R:::FQI::S::TVT:::::::::
HVO_1261        :A:::VT:::::::AA:::LS:A::T::VRMD::::ATA::::::::::VE:::::A:::

consensus       DDSAYVAAPPDAAVDVLVLTNDRNRYLTTALSVIDEVNLTVRQPPTAIQGNYDVILYSNV
#oth            ..3211...3.13.1..111..2.2.1.1....123.21..31...22232..112..11
HQ1754A         ::V::I:::S:QR:N::L:S::P:S:F:::::::E::S:::A:::::V:N::::::::DL
rrnAC1218       :::V:::::A:::::::::::::::::::::::V:R::V:::::::T:::D::I::::::
Hmu2504         :::V::::::::::::::V::::::::::::::V:A::V:::::::T::AE:::::::::
Hbo0287         ::T:S:::::::V:::::V:::E:N::::::::::S:K:::KN:::PTD:::::VV::::
HVO_1261        ::AL:::::G::S:::::::::E:::::A:::::P::S:::DN::::VST::::VI::::

consensus       DPERLLAGNVEAGRELVADGGGVAVQAQDNLPQRYRDLLLIDPGETGTNPTLGRPAQTQL
#oth            2332..2..111..13221....212..343.32.2..1.2212213111.223222221
HQ1754A         ES::::D:::::::DVL:N::::G:I::QSP:AA:::::::::QG::A::::D::Q:SE:
rrnAC1218       :RSS::P::::T:::::E:::::::L:::::::::::::::E::::KAGA:V:QT:::::
Hmu2504         ::NA::P::::T:::::E:::::::L:::D::::::::::V:::::R:GA:VT:T:::::
Hbo0287         EG:::::::LQ:::DAIKN::::VI:::SPM:K::D::::LS:NG:::::::TS::K:E:
HVO_1261        N:G::::::::::::I::::::::I:::EES:S-:G::R:VSQ:SVE::::I:TVESHPI

consensus       TRGIDFQPPEEYVAGSLRSGQALVATSDGTPLIATERRGGGRVLYYGYIEDRSSFKFNYQ
#oth            1.3.3.2..22.13.2.12.2211412...122.122.33.121...2211312.11...
HQ1754A         ::E:G:T:::T:LT:::TG::S:L::T::::IL:::::AN:::::::SVV:NDP:R::::
rrnAC1218       :::::::::::::S::::::S:Q:QL::::::::::D:N:::LM::::::::::::::::
Hmu2504         :::::::::Q::::::::::SVQ:GL:::::::::DD:D::::M::::::::::::::::
Hbo0287         M:N:N:P:::L:LQ:E::E:K::LK:A::::M:::AQ::S:QI:::::::SD::::Y:::
HVO_1261        ::D:T:P::T:::::D:::::S::N:T:::S:V:V::::A:::::::FM::S:A::Y:::

consensus       YPVFWKRAVYYLAGREPLSALNHQTGETLRFGN-TTVETPAGE-VTGNSVRLDRAGFYRV
#oth            .......1111..1.21.12..32..3313111312111.2.312213312.122.2.21
HQ1754A         ::::::::IF:::::::::T::Q:::AQ:Q:E:V:A::::D::SID:QVIS::QT:::S:
rrnAC1218       :::::::::::::D::::P::::E::::V:::::::::G:::P::S::::P:Q:::L::S
Hmu2504         :::::::::::::D::::P::::E::::V:::::::::G:D:S:::::A:S:Q:::H::S
Hbo0287         ::::::::::D::::P::::::E:::TR:S:E:E:SIT::E:A:::AS:::::DS:::E:
HVO_1261        :::::::S:F:::::ST::E::RA::GS:AA:ANR:::::::::A::PE::::D::::::

consensus       GGRQRSASLLSESESAVAAEALDGRSGTADNLTREEERSVPDPLTEWVALGGLVLVLAEI
#oth            3231411..1112..212223113313332331.211231.2..11221.21233333.2
HQ1754A         ::S::GV::Y:ST:::::V:S::EQ:SEI:AQ:::R:TQ::R::GWI:V:::ATVIIG::
rrnAC1218       QS::V:::::D::::NTNV::::Q:::::G::::T:R::::Q::::Y::::::::A:::V
Hmu2504         ES::E:::::D::::NT:I::::R:T:::G::::T:R::::Q::::YF::::::::::::
Hbo0287         D:TRY::::::::::::V:SDI-:ATDNESVAS::::KTA::::::::::AAIGG:VL:V
HVO_1261        :DERF:::::::A::D:::AP:::E:APS:YP::V:::E::::::::A::VA:AATMV:L

consensus       AYLRRRGDL
#oth            21.......
HQ1754A         VL:::::::
rrnAC1218       G::::::::
Hmu2504         G::::::::
Hbo0287         :::::::::
HVO_1261        :::::::::