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5 genomes BUD1813 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1222

HVO_1257

Hbo0291

Hmu2508

- - -

HQ1750A

Pairwise sequence scores
Consensus score2331 HQ1750A rrnAC1222 Hmu2508 HVO_1257 Hbo0291
1862HQ1750A 2359 1745 1705 1682 1681
2146rrnAC1222 1745 2304 2193 1701 1755
2102Hmu2508 1705 2193 2302 1671 1717
1856HVO_1257 1682 1701 1671 2546 1852
1896Hbo0291 1681 1755 1717 1852 2338

340 symbols
consensus       ---------------------MSPEDD---IDALQAKIARVREEIGKRIVGQEAVLEQLL
#oth            111111111111111111111232221122.121.422231.21121..1..3212.1..
HQ1750A         :::::::::::::::::::::::ETNIDVD:::::GRL::::::VS:::I::K:IV::::
rrnAC1222       :::::::::::::::::::::::::Q::::::E::Q:::NA::Q:ST:::::::::::::
Hmu2508         ::::::::::::::::::::::RS:Q:::::::::R:::DA::Q::T::::::E::::::
HVO_1257        MSDNPDRFGDDGQRTAVDGDAAV:T::DLS:EE:::SVGA::D:V::::I::HD:V:R::
Hbo0291         :::::::::::::::::::::-M:G:::::::RV:K:LS:::G::A::::::SD:I:R::

consensus       VCILADGNALLESNPGLGKTTMVRTVADVTDLQFSRIQNTPDLMPSDITGTEIIRETDSG
#oth            1.1.1................11.11121...3...1...................2231
HQ1750A         ::::::::::::::::::::::I:::::::::D:::V:::::::::::::::::::AGGE
rrnAC1222       I::::::::::::::::::::::::::E::::::::::::::::::::::::::::::::
Hmu2508         :::::::::::::::::::::::::::A::::::::::::::::::::::::::::::::
HVO_1257        ::V:C::::::::::::::::L::ALS:A:::G:::V::::::::::::::::::::PE:
Hbo0291         ::::C::::::::::::::::L:::::E::::S:::::::::::::::::::::::I:D:

consensus       REFVFEKGPVFANVVLADEINRATPKTQAALLEAMQEKQVTAAGETYELPRPFFILATQN
#oth            .1....1..1...1.......................1........11..1...1.....
HQ1750A         ::::::R::I:::::::::::::::::::::::::::::::::::::D::::::V:::::
rrnAC1222       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu2508         ::::::::::::::::::::::::::::::::::::::::::::::H:::::::::::::
HVO_1257        :D::::R::I::::::::::::::::::::::::::::::::::::::::D:::V:::::
Hbo0291         :::::::::::::L:::::::::::::::::::::::Q::::::::::::::::::::::

consensus       PIDQGGTYPLPEAQTDRFLLKLLVDYPDYDEERTIVDMYTAGAEQPPVERVLTRTELQAA
#oth            .1..2...1.........11.111...231..12..33112.22311.1.1.2.311322
HQ1750A         :V::E:::::::::::::::::VL:::SAA:::D::TL:AE:ESV:::D:::::D::STI
rrnAC1222       ::::S:::A:::::::::M::::::::::::::::::::::::::V::::S:::S:I::I
Hmu2508         ::::S:::A:::::::::M:::::::::::::::::::N::::::V::::S:::::IR:V
HVO_1257        :::::::::::::::::::M:I:::::EF:::::::KQ:AE:G:S:E:::::P::H:L::
Hbo0291         :::::::::::::::::::M:I:::::EE:::FE::NR::G:GTA:E:::::S:V:::R:

consensus       QQLVREMPIADDIRDRAVQLVRRTREADNVEFGASPRASMALVQTAKARAFLHGRSHVSW
#oth            .11.111.11..2.11112...2..111211.........1.111......12..21.21
HQ1750A         :S::::V:V:::V::Q:IE:::A::T::::D:::::::::G:I:::::::::Q::NY:::
rrnAC1222       ::::::::::::L:::::::::::::::DI::::::::::::::::::::::::::::TG
Hmu2508         ::::::::::::L:::::::::::::::DI::::::::::::::::::::::::::::AG
HVO_1257        :::::QV::S::::N:TIE:::S:::DEQ::::::::::::::LA::::::V:::T::::
Hbo0291         ::F:QQ::::::::::T:R:::S::::E::::::::::::G::LA:::::::A:::::::

consensus       EDVEAMAAPVLRHRIILDFRAEREGRTADDLIAALLEE--
#oth            1.1211.3.11....21........3221.2134..3221
HQ1750A         D::T:::R:::::::L:::::::::MST::V:DN::TAYT
rrnAC1222       ::I::L::::::::::V::::::::::::::::::::-::
Hmu2508         ::I::L:::::::::VV::::::::::::::V:S:::-::
HVO_1257        :::VE::P::I::::::::::::::LDP::V:QR::N:::
Hbo0291         ::::E::L:I:::::L:::::::::I:PE:AVRQ::D:A: