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5 genomes BUD1814 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1219

HVO_1260

Hbo0288

Hmu2505

- - -

HQ1753A

Pairwise sequence scores
Consensus score5779 rrnAC1219 Hmu2505 HQ1753A HVO_1260 Hbo0288
4758rrnAC1219 5812 5153 2971 2988 3025
4727Hmu2505 5153 5804 2976 2940 2927
3697HQ1753A 2971 2976 5842 3004 3118
3766HVO_1260 2988 2940 3004 6000 3425
3792Hbo0288 3025 2927 3118 3425 5795

821 symbols
consensus       ---------------MAVSATLA------------AGLTVGVERPLFLLALPIAVGLLAA
#oth            1111111111111112423413322221122222241311.122112.21..11232223
rrnAC1219       :::::::::::::::::::Y::T::::::::::::E:::::::QLWP:::::V::::::Y
Hmu2505         ::::::::::::::::R::::I:::::::::::::D:::::::HLWP::V::::::V::S
HQ1753A         ::::::::::::::::IMNI:MLSYDVPLSVRTSFGDIV::LN:::A:I:::::IAAVIG
HVO_1260        MAALGSASAVLPALDAVAAT:P:AATTPLAWTVEA::R:L:LQ:::::V:::V:AL:AW:
Hbo0288         :::::::::::::::-M:GFE:P::::::::::::T:M:::::::::::::::G:I::W:

consensus       LIRRGADGT--ASNRSRRLLLASRILVVCLLVLAAAGPYTVQTRETPGEPGVTLLVDRSA
#oth            1131122.111.12...111221.21212...22.11.1.12121.3.1.3.1..1.2.2
rrnAC1219       :::::EG::RS:::::::::::::V:I::::::G:ME::::::::::::::::::T:D::
Hmu2505         :V:::SG:PRS:::::::::::::V::::::::G:M:::::::::::::::::::T:E::
HQ1753A         F:NYR:S::::::A:::::FAI:::T:IA:::F:::::F::I:M::T:D:S:S::::::N
HVO_1260        ::F:::::::::GG::::::F:::L:::V:::V::::::::A::M:D:D:Q::::::D:D
Hbo0288         FVWYR::::::::::::QWFFVV:::T:V:::VS::::::A:ST::L:::K::::::::D

consensus       SMAVYPNTTDELVRDIEDEGVPVTRSTIASGGSSPIGDGVAANLRENGTVVVVSDGRVTE
#oth            .12131231231122..21.1.1123.111123.11..11....11..11211...11.3
rrnAC1219       ::GI::::::A::::::::::::::A::G::SN:RL::::::::Q:::::::::::::::
Hmu2505         ::GI:::::::::::::::::::::V:VG:ESE:R:::A::::::::::IA::::::A:A
HQ1753A         :T::G::Q:E:::EG::S::I:A:V::::R:ER::::::I::::Q:::S:::::::QA:G
HVO_1260        ::::TEDVASQ:AS::::::::::T::V:R::::::::A::::::P:::::L::::Q::S
Hbo0288         :TT:A:QRA:KVASA::KA::::ATT::::::::::::::::::::::S:LLL:::::::

consensus       GRSLSTAAEDARSLNATVSTVTPESPRTERYVTIAGPSKTSVGVESQFLVSVRGV----E
#oth            .1..132122.23111.113.3231231.11.223...11.1..223212213..11112
rrnAC1219       ::::A::::::AG:::::HS:::Q::::::A:::::::TV:R::R::YT::ME::::::S
Hmu2505         ::::::::A::DA:D:::HG:::R::::::A:A:::::TV:R::QTKYT::M:::::::S
HQ1753A         :Q:::AT::F:::I:::I:::AFD:TQ::Q:::LT::::::::::::I:TR:::::::::
HVO_1260        ::::AS:TTL::D::::::A:GV:PTE::Q:::VS::::::::::NA::AQ:D::VPEGA
Hbo0288         :::::EVT:L:::::T:::::S::PNTK::::SVN:::::::::::T:::::G:::::::

consensus       VNEPVPVTVTIDGEQVTEEEL-RPTGTLEVDHTFEELGAHRVTATLEGDDEYARNDVFRK
#oth            34311312.31...2.2122222311332131..132.2..1..33122.3132.11112
rrnAC1219       :L:::::E::::::T:::G:::::D:::T::::::A::S:::::::S:::::::::::Y:
Hmu2505         :F::::::::::::T:::G:::::D:::T:::::::::::::::::S:E:::::::::YR
HQ1753A         ATD::T:::S:::::::::T:DDG::RIP:R::::SV:::::::AV:N::T:SQ:NIA:S
HVO_1260        EGAT:ELV:DV:::E:AR:VV:NT::GV:FSQ:::TT:T:::::RI:S::RFQT::::::
Hbo0288         I:T:AK:::AV:::::L:TTIQNA:DAR:FT:::S:T:T::I::EM:ST:KFEQ::::::

consensus       TVRVVEQPDVLYVSRGEYPLRNYLDQLYNVETASSVPADLDDYAAVVVQDTPASDVGNTD
#oth            11.1.23.31....212..132..321.2.211211.22.12.2...2.1231323..32
rrnAC1219       S:::::::::::::Q::::::::::S::::S::::::::::::::::M::::SGNM:::T
Hmu2505         S::::::::::::::::::::::::S::D:T::A:::SA::::::::::::S::::::AT
HQ1753A         :I:::NK:TI::::Q:::::QS::Q:::T::::::I:ET::P:Y:::::N:A:D:L::IE
HVO_1260        ::::::P:R:::::::D::FGD::S:::D::::ET:::::SS:H:::L::LR:E::::::
Hbo0288         :::A:DR:KI::::ERG::FES::RNV::::KR::::E::SP:Y::::::M:::RI::V:

consensus       ALQRFVIDGGGLLVAGGDNAFENGGYESSSIASMLPVQVGNGTGGESNIVLAIDVSGSAE
#oth            2..21.11.1..122..2.21.1.1.12.1211....21.2122122121321...1.22
rrnAC1219       :::D:::N::::V:::::::Y::::::T:PV::::::R:::A::::::::ILV:::::::
Hmu2505         :::E::VN::::V:::::::Y::::::T:P:G:::::::::A::::::::VLV:::S:::
HQ1753A         R::::::::N:::ML::P:G::G:::D::::GT:::::::E::P:SARVI::::::::TG
HVO_1260        S::::::::::::TV::R::::::::DG::L::::::TT:E:ASQQT:L:F:::::::::
Hbo0288         :::EY::::N::::V::P:S::::N:::::L::::::TT:D:R:QST::::S::::::SK

consensus       SGMRVQKAVALDALDQLGDENRVGVVGFNHRAYRVAELRPLGQNRAETADRIRRLESGGA
#oth            1.121..1.1.21.2....113..1.1..321.3.22223.12..232122..1.21..1
rrnAC1219       ::LS::::::::V::::::::Q::::A::QN::::S:MQA::::::::::K:::::::::
Hmu2505         ::LSI:::::::V:::::::::::::A:::N::::S:::T:::::::::EK::Q::::::
HQ1753A         :::QI::::::N::G::::STS:::::::RQ::E:VG:EQ:TE::DT:RQ:::Q:RA::G
HVO_1260        :::::::S::::::::::::::::I::::Y:::D::P:::::P::ESA::L:::::::::
Hbo0288         G::::::::S:S::K::::::E::I::::::T:S:::RQ:::P::EAL:::::::QA:::

consensus       TDIAVGLRGADELLGDRRGTIILISDGQDRLGPAAAVANQLGREGTRVISVGAGKRVNEP
#oth            .1..2..2..322.1122..1..1...2.13332232.31.112.211121.2.211113
rrnAC1219       :::::::Q::::::D::E:::::L:::::::::P::::::::::::::V:::V::::GVA
Hmu2505         :::::::Q:::::::::E:::::L:::::::::P::::::::::::::V:::V::::GV:
HQ1753A         :N::N:::::E:M:DGQ:::V::::::V:ARSR:TV::ES:::R:V:::T::::Q:::::
HVO_1260        :::::::D::AQQ::::::::::::::H::FQD::TL:D::::D:VS::TI:T:PNP::R
Hbo0288         ::::G:::::GKM:::DP::V::::::H::VEESISY:K::RS::K:I:AI::::NP::K

consensus       TLRQIARASGGSYFAADETDRLRILFGGSSRRYAGEGLTIVDENTFITAGVELTANPGQA
#oth            2112..32...2.12.2..2..11....131214.11..2.1322.1.1..11..2.122
rrnAC1219       :M::::SE:::::::::::E:::L:::::::::Q::N::::T:D::::::::::::::::
Hmu2505         :M::::GE:::::::::::E:::L:::::::::R::N::V:T:D:::::::::::D::R:
HQ1753A         L:E:::DI:::T::Q:N::::::::::::G:QFD::::::::SGH:::S:::V::T:D:V
HVO_1260        :::A:::::::N:LR::::::::::::::N:Q:::D:::V::Q:D:V:::::::::::SV
Hbo0288         N::T::::::::::R:T::N::N:::::A-QS:E:::::M::P:::::S::R::::::ST

consensus       NDVSVRPGADFLVATADGKPAVASWRYGLGRVATITAYDSDGTLGGLLDRPDSLLVTKSV
#oth            .1.2112.1211..331.2..1.2..1.....112.1.3211211...33....11...1
rrnAC1219       :N:Q:K::::YQ:::::::::I::::F:::::VS:::::::N:M::::::::::V:::::
Hmu2505         :N:R:K::::YQ:::::::::I::::F:::::VSL::::::N:M::::::::::V:::::
HQ1753A         ::::::::GT::::GSN:D::::A::::::::::::::Q:G:G:::::NE::::::::::
HVO_1260        ::::::S::N::::AD::T:::::::::::::::V:T:AG::::D:::QS:::::L:::T
Hbo0288         ::::I:R:::::::SE::T::::T::::::::::::T:GA::S:D:::GK:::::L:::T

consensus       NYAIGDPERKATGVTGVDDTRVGRPTTLTYRGDSRP-DAANVSFRQVGDGRYRAEVTPRE
#oth            ..11.1.2.121.11322.1..1211.21.1.111.1322231111.21.2.11211.32
rrnAC1219       :::V:::M:TQ::::A:G:A::::::::::Q::::::::::I:::::::::::G:F::::
Hmu2505         :::V:::T:TQ::::S:::A:::::::::::::::::::::::V:::::::::G:F:::N
HQ1753A         :::::N::::T:::::A::::::S:A:I::::::P::TNTSA:::A:R::V:::S:::ET
HVO_1260        ::V::::::::S::AE:S::::DQS::VV:::GE::RGVEGLR:SA:SP:V:E:T:V:T:
Hbo0288         ::V::::::::::I::IS:::::SS::V:::::E:::FVEG:::::::::A:::S:::D:

consensus       AGYQEVLDTAYAANYPVEYAGFGPSDALDALVEATGGQTFTPDDGEEIAEFARQQSTRVR
#oth            2.133221121.1..11.112..2321.221.3411.3313122211..331.22122.1
rrnAC1219       ::::AA:::E::::::::::S:::::S::::::T:::::::::Q::Q::SE:::K:::::
Hmu2505         ::::T::::E::::::::::S:::::S::::::R::::::S::E::Q::RQ:::K:::::
HQ1753A         E:FK:ISGAT::::::A::::::TAP::SEA:R::D:RQ:E:S:TA:::::::::::Q::
HVO_1260        T::RD:::::F:V:::::H::::RPA::E:A:SDS::TMYG:N:AA:::AS::DNAAG:Q
Hbo0288         ::FH::M:A::::::RA::GA:::DP:::D::DG:::KE::A:Q:::::::T:E::R:::

consensus       TVRDDWEWVALLGALLLFTAEVVARRVQVYRGRTQLESGLP
#oth            3.333.3122232.1231341.22.....1112.33.1..2
rrnAC1219       ::Q:T:D::::::::::::G::::::::::::::S::::::
Hmu2505         :::EN:::::::::::V:::::::::::::::::T::::::
HQ1753A         D:EQR::::LIIL::II:VT:::I::::::Q:H::Q::::T
HVO_1260        P:::::AVAFVAA:F::YLI::L::::::::::::S:G::I
Hbo0288         S:KT::T:L::VL::VS:SLD:IY:::::R:SS:AG:G::T