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5 genomes BUD1818 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1223

HVO_1256

Hbo0292

Hmu2509

- - -

HQ1749A

Pairwise sequence scores
Consensus score2174 HQ1749A HVO_1256 Hbo0292 rrnAC1223 Hmu2509
1485HQ1749A 2182 1237 1279 1304 1222
1532HVO_1256 1237 2265 1362 1276 1218
1656Hbo0292 1279 1362 2151 1409 1376
1873rrnAC1223 1304 1276 1409 2207 1970
1808Hmu2509 1222 1218 1376 1970 2153

309 symbols
consensus       -----VTIEPDFLDELDRFDASLNRQSTSIRQGEQESPRVGEGLTFSDYRRYSPGDDTRL
#oth            1111111.2.2.12.12..311.313223211.1.2.12..1......1...11...1.1
HQ1749A         :::::-M:N:T::E:V:::::::EQEA:G:QR::::::D:::::::::::::::::::::
HVO_1256        :::::-M:D:G:::::::::T::K:V:NAR::::::::D:::::::::H:::AA:::P::
Hbo0292         ::::::::::::FA::E::E:::Q:I:EDVQ::::::RS:::::::::::::A:::::::
rrnAC1223       MGGTV:::::::::::G::T:A::::T::::::D:Q:::::::::::::::::::::::R
Hmu2509         ::::::::::::::::G::S:A::::T::::::D:R:::::D:::::::::::::::::R

consensus       IDWKLYARTEEYFIKQFEEERSLTVHVLVDTSASMDYGDA--DAHKFEFGAKLGLGFAYL
#oth            ...1111..1.111.11.1..1....1.1.1.....1.1211221...211.11..111.
HQ1749A         :::R::G::G::Y:::::::::::::::::A::::::::PDI:T::::::::::::Y:::
HVO_1256        ::::V::::::L:::R::A::N::::::L:A:::::F:EG::::N:::Y::::::::CH:
Hbo0292         :::RV:::::::YV:::::::N:::::::::::::::::G::::::::::::I:::::::
rrnAC1223       :::::F::::::::::Y:::::::::L:::::::::::::::TS::::YA::::::::::
Hmu2509         :::::F::::::::::Y:::::::::L:::::::::::::::SS::::SAT::A::::::

consensus       TAEENNDFRFSTFRDRPDRIDTGQSNRGELLRLIDRLNETTPGGDADFESALEAYAERIR
#oth            ..1111..2.12121113.1.113.2..11.211121..211314212321.23..22.2
HQ1749A         :::AHD::K::I:K:::E:L:A:T:T:::V:G::::V:::::R:ET::AT:::S::GL:N
HVO_1256        :::::::::::LLG:L::::::DA:S:::V:::VE::::::::::G:ITA::ST:::T:H
Hbo0292         ::::::::::::::N::K:L:::R::::D:::VV:L::::ELSDK::LV::::E::ST:H
rrnAC1223       ::::::::Q:C:::::VN:::::::::::::S:::Q:::M::::T:::::::::::::::
Hmu2509         ::A:::::::C:::::V::::::::::::::S:::Q:::S:LA:Q:A:::S:A:::::::

consensus       SRSLVVVFSDCLTDPDELESGIAALARN--DVLLVQVLAPDERDPGVTGDTIFEDPESDE
#oth            ....11121.2.3111311112.1112.11..1121211.3.2..322..21.111..23
HQ1749A         ::::I:IIT:::G:L:S::::L:SI:Q:::::I:I:L:::G:V::NPA::::::GV:::V
HVO_1256        :::::IIV::L:F:::DVA::L:::::::::::VA:::T:::L::EA:::A:::::::EA
Hbo0292         :::::::V::F::::::V::AV:::EE:::::I:::T:::::L::D::::::::::::GD
rrnAC1223       ::::::::::::A::EA:::::::::::DA:::::R:V::A::::::V::VL:A::::::
Hmu2509         :::::::::::::E:E:::A::::::::DA:::::R:V::E::::::V::VL:A::::::

consensus       TRRSYFGGSLAEQYRDRLDAHIDAVSNRVTALGADHVLVNTGADFFDAFADVWLQ-----
#oth            12.1..1.12122.32.1121232122.312112213113.1221..2..23.2211111
HQ1749A         SQ:T::::R:L::::N:V::F:ND:EA:TQR:RIT:AF:P:DQ:::::::AT:IG:::::
HVO_1256        :::T:::::A:R::T:::QR:LA::DE:CQ:::IERE::D:::E:::T:::L::GARFGG
Hbo0292         SL:::::::M:NK:H:::QS:VE:I:E:A:THR:::I::::::A:::::::::VE:::::
rrnAC1223       ::::::S:::::T:QS:::::::S::::::::::::::I:::E:Y::S::SI::::::::
Hmu2509         ::::::S:::::T::S:::::V:S:::::::::G:::::E::EEY::S::S:::::::::

consensus       ---------
#oth            111111111
HQ1749A         :::::::::
HVO_1256        ERRGGRGGG
Hbo0292         :::::::::
rrnAC1223       :::::::::
Hmu2509         :::::::::