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5 genomes BUD1834 7 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2535

-

Hbo3007

Hmu0838

Hmu2990

Hmu3071

Hut1389

- -

HQ1295A

Pairwise sequence scores
Consensus score2467 Hmu3071 HQ1295A Hmu2990 Hut1389 Hbo3007 Hmu0838 rrnAC2535
1455Hmu3071 2669 1024 917 1184 1211 1270 1169
1490HQ1295A 1024 2911 977 1175 1241 1329 1297
1239Hmu2990 917 977 1708 1063 1082 1108 1100
1779Hut1389 1184 1175 1063 2688 1598 1483 1504
1857Hbo3007 1211 1241 1082 1598 2371 1557 1548
1970Hmu0838 1270 1329 1108 1483 1557 2481 1637
1881rrnAC2535 1169 1297 1100 1504 1548 1637 2482

421 symbols
consensus       -----M-TQ-RP-SGSR-------AAATPDTADDA-------TPALVVDGLSKRFGSGDD
#oth            11111354453354323122222234545434314111111333212.2213.2122.34
Hmu3071         MDSRDEF:LMTAD:::LHDEETDRET:AT:PTT:D:::::::ESV:S:RN:E::Y:R:::
HQ1295A         ::::::VVMG:SAVT:L:::::::E:M:KRNQ::N:::::::S::::::SVG:Q:::::S
Hmu2990         :::::-:--:--:----:::::::------MSN:::::::::-:D::::::T:::DD:--
Hut1389         :::::VNGGTT:M::::HNVDHASDGPP:::TT:GEQALTPE:A::S::::::T::::E:
Hbo3007         :::::-:--:--:----:::::::-VS:AE:::RE::::::S:A:VA:E::T:T::::AE
Hmu0838         ::::::K::E::QTSAD:::::::::::D:PP::::::::::--::::E::::::A:::A
rrnAC2535       ::::::SS:RP:RQ::::::::::::EQ:S::K:G::::::A::::A:E::::Q::::A:

consensus       AVTAVDDVSFTVEPGSVVGLLGPNGAGKTTTIKSILGLVLPDAGSVRVDGIDVAERPRAA
#oth            2.1..2111.3113.21.............1..21..212.13.41114.2.24242131
Hmu3071         ::E::T:LT:D::::T:::::::::::::::::ML:::II:T::::E:A::::H:NLSQG
HQ1295A         ::::::::::S::R::I:::::::::::::L::::::T::::T:AI::L:T::KNER:::
Hmu2990         :::::::L:::::::::::::::::::::::::::::::I::S:::E:G:V::HD:::L:
Hut1389         K::::::::::::::E::::::::::::::::::::::::::E:D::IQ:V:::D:::R:
Hbo3007         S:::::G::::I:S:::::::::::::::::::::::::R::::T::I::::T::N::Q:
Hmu0838         ::::::::::S:GR:::::::::::::::::::A:::M:::::::::I:::::Y:Q:S::
rrnAC2535       :::::N::::RI:Q:T::::::::::::::::::::::::::S:RI::Q:::MS:S::::

consensus       YANVDAMLEGARNDYWRLTVRENLRYFATISGIDPDAVADRHDRLLDRLDLAEKADEPVR
#oth            2341111......2......31.1.1.1313.42.2323321321.351114121.23..
Hmu3071         :NSIS:V::::::V::::::KQ:V:F::SL:::::NDR:SY:TE:::LF::T::::TA::
HQ1295A         ::::::::::::::::::::Q::::::::::::N::S::T::A:::E::::TTW::T:::
Hmu2990         HRQI:::::::::N::::::E:::::::G:::L:::::LEEC:EI:Q:FEID::R::V::
Hut1389         :EH:::::::::::::::::::::::::A:R:N:::TLD:::TE::EAF:I::E::TE::
Hbo3007         FNR:::::::::::::::::::::::::A:G:D::A::S::::Q:::T:E:S::::::::
Hmu0838         ::::::::::::::::::::::::::::::G:V:::S:::::E::::Q:::::::::A::
rrnAC2535       :RH::G:::::::::::::::::::::S::K:VK::::::::E:::AK:::L::::V:::

consensus       DLSRGMKQKVSLASVLAGDADVVFLDEPTLGLDVESSLTLRRELRRIVDERDLTVVLSSH
#oth            2....1.......111132322221..........1212.23..212221332.2311..
Hmu3071         E::::Q:::::::CTF:RET:::V::::::::::::G:N::Q::N:::::YGT::I::::
HQ1295A         ::::::::::::::::::G:ELL::::::::::::G:R:::S::::LAI:DG:::I::::
Hmu2990         N:::::::::::::::VT::SI:CI:::::::::::TRQ:KK:::NTI:QQ:M::L::::
Hut1389         :::::::::::::::::::VS:A:::::::::::::::::Q:::V:L:E::E::LFV:::
Hbo3007         :::::::::::::::::S:VS:A:::::::::::::::::::::::::::::::::::::
Hmu0838         :::::::::::::::::T:::::::::::::::::::::::::::::::::A:::::C::
rrnAC2535       :::::::::::::::::SES:L::::::::::::::::::::::::::::::::A:V:::

consensus       DMDVIEDVCDRVIIMNDGEIIADDSVANLLDQFETQRFAITSN-DLDEATLARLRERFEV
#oth            ..1...11....11.431322322414522443444434244512334533232223333
Hmu3071         :::::::L:::::::E::::V:::::S:::GV:NQ:CYE::VDG::Q:::RR:::TEY::
HQ1295A         ::A::::::::::V:A::G:V::SD:ET:VETVGGD:LQ:K:::::TPRIVS:::::ITK
Hmu2990         :::::::::::::::H---------------------------:-------:LAK:----
Hut1389         ::::::A:::::::::Q:R:VV::T::::::G:::TGYR::AR:G:::P:::D:QD:::L
Hbo3007         :::::::::::::::S:::::INSE::E::E:::::::R:SL:::V:SD::SL::::YD:
Hmu0838         ::::::A:::::V:::::RV::::T:ER::SGDG:::::VA:S::I:::L:::I:DG:::
rrnAC2535       ::::::::::::::::E:::::::::PAV::::TANA::V::P::ITDGL::II::::::

consensus       SEVDAT---DRRTRFEVAADSDGFYRLADALRAADVTLDSVETVRPDLEDVFLEIT--GN
#oth            434465111444423224323323131645345221334524133221222232313336
Hmu3071         E:F:GQ:::YES:::RARVAD::I:N:MQS:QS:G::V:TI::::::::E::::V:NARH
HQ1295A         TALK::IDS:SDPHI::EISEVSL:::FNI:EG:::EIEQIQ:IEVG::EALI:L:STQS
Hmu2990         ------:::--------IV::::WS-------------------------------::--
Hut1389         :A:ERL::::G:V::::::::AT::::T:::E::::E:GG::::Q:::AEA:::V:::::
Hbo3007         :DI:QF:::::::::::T::NET::::I::IAE::::::::::IQ::::::::::::::T
Hmu0838         T::TTD:::GE:::V:::T::E:::D:::Q::::::A::::N:A:::::::::GL:DE:E
rrnAC2535       V::TS::::E:GR:V:::T::::::::LALC:NH::::SA:G::E:::::::V::::::Q

consensus       GRR---------------------------------------------------------
#oth            343323322322221111111111111111111111111111111111111111111111
Hmu3071         AT:PAEVPTR::::::::::::::::::::::::::::::::::::::::::::::::::
HQ1295A         QADTRTQAGSVDESHTKVGDPSVNKNQQEAKSPGGTEISTDSIQRSNHSESDMGRSREHD
Hmu2990         ---:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut1389         :DSLANGATGGTDQ::::::::::::::::::::::::::::::::::::::::::::::
Hbo3007         :DS:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu0838         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2535       ::-:::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -
#oth            1
Hmu3071         :
HQ1295A         I
Hmu2990         :
Hut1389         :
Hbo3007         :
Hmu0838         :
rrnAC2535       :