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5 genomes BUD1837 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2885

-

Hbo2803

Hmu2877

Hut2878

- -

HQ2311A

Pairwise sequence scores
Consensus score1365 Hbo2803 HQ2311A Hut2878 rrnAC2885 Hmu2877
788Hbo2803 1385 628 637 662 651
820HQ2311A 628 1388 682 665 674
1125Hut2878 637 682 1345 997 999
1111rrnAC2885 662 665 997 1371 1115
1138Hmu2877 651 674 999 1115 1362

188 symbols
consensus       MSNTNND----MGAEWTE-MVEQMNEAYAESVEQNMKAQAAFVESWADAVDDSILEEEDF
#oth            111313222223141231111.122212312311.13..11.112.3.112122212133
Hbo2803         -M:S:SGGESPP:GD:--:GF::LR:::M:GF:R:IE::S::::A:Q::::ETM:S::AM
HQ2311A         :::NA::PTEM::T:TM:S:F::FSQT:TDALKR::D::SE:ADT:M:S::E-M:S::Q:
Hut2878         ::DK:A:::::V:::YS:::::E::::L::::::::Q:::::::::S::LS::VM:DD::
rrnAC2885       ::::::-::::IQE::::::::E::N:V:D:M::::::::::::::::::E:T:P:QD:L
Hmu2877         ::D::Q-:::::QD:::::::::::::VS:::::::::::::::::::::E:::P:::NV

consensus       ADGIEGYNQAYEEWMDAAEAMLERMGDAAQGEDVDPTEFRDIWLSSANEAFKEIMGTSAF
#oth            31222.123.1.2..2...4131.231121.11..122......31..1.1.1211.21.
Hbo2803         Q:S::::VG:::V:::::::S:S::SS:YE:K:::ISN::::::EA::D:::::AS:QG:
HQ2311A         D:AS::AAE:::S::Q:::SSY:::::MI::::::::D::::::NA:::::::S:S:T::
Hut2878         T:::::::::T:V::::::R:F::SA::::::E:::::::::::::::::A:::::::::
rrnAC2885       :::MD:::R::::::::::Q:V::ST::::::::::A:::::::Q:::::::HV::::::
Hmu2877         :E::Q::::::::::N:::K::::T:::::::::::::::::::::::D:::HV::::::

consensus       AAANGQLVESMLDMRQQADDIAQETLAQLGFPTRGDVDEIGERLVELERRQHAVEQKLDR
#oth            .111..22122222112221422111331.12.23.12.11...2.2....121.2..12
Hbo2803         :TMT::T::ESFGL:GDFGE:QR:::RN::V::ES:I:::::::L:F:::::K::::::E
HQ2311A         ::MT::NL::V::FQ::MN:T:E:::HGM::A:T::IR::::::::V::::Q:I:S:::Q
Hut2878         :::::::IQ:::::::::::FS:::I:E:::::::::E:::::::::::::::::E::N:
rrnAC2885       :::::::::::ME:Q:E:::LS:D::E:::::::N:::::A:::I:::::::::::::::
Hmu2877         :::::::::T:ME:::::::V::DSI::M::S::E::E:V::::::::::::E:::::::

consensus       ILNALEE-
#oth            21222111
Hbo2803         V::::::E
HQ2311A         LI:QS--:
Hut2878         ::E:V:::
rrnAC2885       V:EH::::
Hmu2877         ::DH::::