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5 genomes BUD1857 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1921

HVO_2181

Hbo1895

- -

hla1876

-

HQ3079A

Pairwise sequence scores
Consensus score830 rrnAC1921 HQ3079A hla1876 HVO_2181 Hbo1895
522rrnAC1921 801 350 407 426 424
530HQ3079A 350 824 387 429 483
552hla1876 407 387 884 418 481
614HVO_2181 426 429 418 822 521
667Hbo1895 424 483 481 521 911

132 symbols
consensus       ------MPTEYGSLEVWGVIAAIGVATFAIRLSFIYLFGRIDEVPPRVKRALRYVPPAVF
#oth            11111111121212311211323.12.122.3...3...11131.222223.21..1..1
rrnAC1921       :::::::A:N::PV:IA::::V:::L:Y:C:::::A::::L::I::V:::V::F::A::L
HQ3079A         :::::::::::T::A::I::L:L:::::T::I:::S:::LLEN::D::T:G:QF::::::
hla1876         VTGGSPL:IG-::::::LA:VL::I::YGF:::::H:::::::::T:I::P::::::::L
HVO_2181        :::::::::G:D:AT::L:::LA::L:::::G::::::::::D:::A:ES::E:::A:::
Hbo1895         ::::::::::::P:SI:::VI:V:IT:::::A::::::::::T::::L:H::::::::::

consensus       AALVFPALVAPSG------------DLAVSVGNERLIAGALAAAVAWRTEDVFATIAAGM
#oth            ...13.2122332111111111111233333221212..22.232..2212.2..133..
rrnAC1921       ::::L:SF::LDA::::::::::::---S:FAPDKF:::::::G:::::::::::MVT::
HQ3079A         :::AA::FI::::::::::::::::-HIEFI:::Q::::IT:T:I::YVD::::::I:::
hla1876         ::::::D::TIRP::::::::::::SV:ATLVD::::::VV:G:::::::N:M::::S::
HVO_2181        ::::::::L::::::::::::::::::::::::DK:V::::::LA::Y::R:L:::LV::
Hbo1895         ::::V::::VSE:SAHFAPISVSLS::S:A::::::L::IV::I:::LA:::::::::::

consensus       GTLWVLRFVV--
#oth            22..32..2211
rrnAC1921       :V::AI::LL::
HQ3079A         L:::I:::GI::
hla1876         V:::LF::::FA
HVO_2181        :A::::::::::
Hbo1895         V:::::::::::