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5 genomes BUD1878 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3232

- -

Hmu2236

Hut1685

-

NP2386A

HQ2989A

Pairwise sequence scores
Consensus score2942 HQ2989A NP2386A Hut1685 rrnAC3232 Hmu2236
1733HQ2989A 2964 1392 1324 1469 1444
2002NP2386A 1392 2968 1435 1642 1615
2074Hut1685 1324 1435 2765 1675 1645
2302rrnAC3232 1469 1642 1675 2946 2040
2265Hmu2236 1444 1615 1645 2040 2960

402 symbols
consensus       MDIDTAVVLAAGEGTRLRPLTRNRPKPMLPAGNRPILEHVLDALVEAGIERLVLVVGYKR
#oth            142312121111111111111231111....112....1.112..11.222122....3.
HQ2989A         :T:::::I:::::::::::::TH::::::::::I:::::::NS::::::SEIH:::::Q:
NP2386A         :::S:G::::::::::::::::T::::::::AG:::::::::V::DC:::::CI::::R:
Hut1685         ---------------------------::::::T::::Y:::::::::V:E:::::::E:
rrnAC3232       :H:::::::::::::::::::::::::::::A::::::::F:::::::::K::V::::::
Hmu2236         :SVR::::::::::::::::::::::::::::::::::Y:F:::::::LD:I:V::::::

consensus       DRVQNHFGPTYRGVPITYVDQTKQLGSGHALLQARAAVDGPVLVVNGDRLIDEEIVEDVR
#oth            2.1.2.1.221.11.22.14.31...11...1..34212121..2...2212331123.4
HQ2989A         V:::::::S:::NR::::HI:HT:::::::::::NETIETDF::L:::QIVT:::I:T:S
NP2386A         E:I:S:::DDF::::::::H:KT::::A:::E::APV::::::::::::V:G:P::D:::
Hut1685         ::::::V::::::R:V::::::::::T:::::::Q:::E:SF::::::T:::PT:::::T
rrnAC3232       ::::D:::::::::::S::S:::::::::::::::SV:::::::M:::::V:AATI:E:D
Hmu2236         ::::D::::S:::::LR::T:R:::::::::::::D::S:S::::::::V::G:T:GS:I

consensus       DSFEET-GTATLAVLERPDASRYGAVEVRDGRITSIVEK--PDADEYRLINAGVYAFDPS
#oth            2323332322211121432214....214.2222322.111.43111121.1.1.1.332
HQ2989A         S:HTA::D::::G:V:SEK::Q:::::LN:N:::EFI:Q:::TD:::::L:::::V:G::
NP2386A         TA:D--:::P:::AI:H:TP:K::::::S:::LR:FY::PA:S:GPFSH:::::::::RA
Hut1685         :Q:::SEPR::::::DG::PTD::::L:E::LV:NL::::::::G:::Y::::::::E::
rrnAC3232       T:YA::::NTSI:::::Q:T::::::::Q:RD:VD:::::::QH::F::::G::::::GD
Hmu2236         :H::TDPE:PA:::::QR:::H::::DL:::DLV::::::::ET:::::::G:I:::PE:

consensus       IFEAIERTPREAGELALTDTIARLI-DSDAVRAVETDGLWVDATYPWDLLTVAREVLARG
#oth            1.2311212133.1.2.121223.211332.31.21213.1.........3121111231
HQ2989A         ::A:L:::FQ:Q:R:S:PE::RD:TT:ES:::G:V:ESP:Q:::::::::S:MQTLFDQN
NP2386A         V::T:::M::PS:::Q:PTVVET:L:ENK::H::::A:::::::::::::A:L::L:EA:
Hut1685         :::M::::::::::::::::L::::::DRS:G::::::T:::::::::::EL::T:::N:
rrnAC3232       :::::DE:T:H::::::::::EL:L:E::R:Q:::V::M:::::::::::::::::::::
Hmu2236         ::DE::A:::AE:::::::::::::::::R::::T:::::::::::::::::::::::::

consensus       RVAEE--ERRDQVWVDDSARVHEAATLQPPVVVGPDCEVGAGAVIGPNVALGRNVTVGAN
#oth            124321122322.12131.31.12..112.11111.3111121.2..31.2.2.1.1..1
HQ2989A         :IGD:TT:QSPG:FS:QT:TI::D:::R:::I:SA:TV::PQ::L::G::V:E:T:I::G
NP2386A         A::I:::::EP::::A::::::::::::::::::::A::A::::V::H::V:::::::::
Hut1685         :LDPP:::S:::::I:A::S::::::I:::A:I:::S:::::::::::::I:::::::::
rrnAC3232       ::V:S::A:DE:::::N:::::DE::::S:::I:::::I:PD::::::::::::T:I:::
Hmu2236         ::T:S::N:::S:::A:::H:::D::::A::::::::::A::T:L::DA:::A:::::::

consensus       ATIQNSVLDADTRVDPGSTLIDTVLGQAVTLGPNTVVPGGPADVRIGTEVFEDQRLGAVI
#oth            31234311.2.2.113211.2.213112131.122212...1.11111312.133..112
HQ2989A         :VLT:VLV:S::::GQNA:::::::::G:H:::GVIIA:::::I::D:K:H::CD::G::
NP2386A         T:VRD:L::S:S:A:V::I:C:C::SE:ASV::GVA:::::G:I:V:DDI::Q:::::::
Hut1685         G::ATA:::D:A::G:::::::AIV:::::::::A::S:::G::::::AIY::EP:::LL
rrnAC3232       SV::HT::::::::::S:::::::T::D:D::V:::::::::::QV::::::::::::::
Hmu2236         ::V:Q::::::::::A:A::V:::A::D::::VE::::::::::Q::::::::RT::::F

consensus       ADRATAGGDVSVAPGSLVGPNATLAAGVHVEGNVAEEAEVVR
#oth            ...1222.211132.2.1.23.222211333131322...2.
HQ2989A         :::::V::G:T::S:::::SA::IQSNA:ID::IPN::::L:
NP2386A         :::::V::GAT:TD:A:I:VG::V::::VL:A:::D::::::
Hut1685         :::VE::::::F:::T::::::H::T::S:::C:T:G:::R:
rrnAC3232       ::::V:L::::FVS::::::::R::T::T:N:T:R:G:::::
Hmu2236         :::V:TR:N:::S::T::::S:::H::::AF:H:::D:::::