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5 genomes BUD1880 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0429

- -

Hmu1105

Hut1231

-

NP1922A

HQ2691A

Pairwise sequence scores
Consensus score2836 NP1922A HQ2691A Hut1231 rrnAC0429 Hmu1105
1892NP1922A 2817 1514 1563 1646 1608
2072HQ2691A 1514 2904 1931 1715 1656
2219Hut1231 1563 1931 2774 1931 1886
2318rrnAC0429 1646 1715 1931 2980 2050
2290Hmu1105 1608 1656 1886 2050 2934

401 symbols
consensus       ---------------EADLPGVCVVTHPLAAAGENATRTLLDILAAITSVSLVTADLPAD
#oth            11111111123333334433311.1...121.1.11111..11.22223.1..1111132
NP1922A         :::::::::::::::MSEPDD:::::::IGS:S:SHAE::::::G:::D::::AISVAEE
HQ2691A         :::::::::MLIRPIYMTDQ::::I::::G:::::::::::::::EVD::::::::::TN
Hut1231         :::::::::::::::--------::::::S::::::::::::V::TLGP:A:::::::G:
rrnAC0429       MTEPTRHQEHETETQ:::::N:::::::::::::::::S:::::S:::::A:::::::::
Hmu1105         ::::::::::VVTMS:DG::::::::::::S:::::::S::E::::V:T:::::::::::

consensus       SEIRDRRELIELTQKGAGNS-VLVAAARFLLNQLRMCAAIRRRPEDVVLFFGATAYLLPI
#oth            .211132121.1122.2.411131..4...2..1..122122.1.211..1.1.1.12..
NP1922A         :PL:EEYDT::VSRV:T:GP:IPI::L:::A::V::AMIL:::::E::::::V:::::::
HQ2691A         :S:H:N::V:::::::S:::::::::T:::F:::::::V::Q::::IT::::::::V:::
Hut1231         :S:::D::V::::E::::E:::::::V:::::::::::::::::::::::::::S::I::
rrnAC0429       ::::::H::V::::::::D:::VI::F::::::::::RV:AG:D::::::::::S:::::
Hmu1105         ::::::H::::::ER:::Q:N:A::::::::::::::R:LVG:D:A::::Y::::::A::

consensus       LFARLIGKTVLVEPRGDVPLTLRLNWEQRLPDVLARALAGAVRALERAGFAAAHGVITYT
#oth            221112..1.121...1.....1.1..121.231.24..14.121.13.123.1311...
NP1922A         VA:K:A::::VLQ:::N:::::::H::R::::::::G:::V:WSM::L:YH::DAI::::
HQ2691A         ::::A::::::T::::::::::Q::::::M:NT::::::NG::L::WI::MT::T:::::
Hut1231         A::::::::::::::::::::::::::::M::H::GI:::S::L:::::::I::R:V:::
rrnAC0429       VVT::L::::::::::::::::::::::Q:::QV:AV::::::::::::::V::::::::
Hmu1105         :::::L::R:::::::::::::::H:::S::A::::T:::L::::::S:::::D::V:::

consensus       PNMARQLGLDPDSPRVYPNGARYVDTDRFRPRTPFEERDRVVGFLGRLDEEKGVRELAAV
#oth            .3..2111.1132221..2...112.32.4122.212.1211..1.......11.2.11.
NP1922A         :S::EE::::RFEEKL:::::::::::E:Y::V:::::::::::::::::::N::T::::
HQ2691A         ::::::V:::::::S:::H::::I::E:::::::::K::TLI::V::::::::::S::::
Hut1231         :::::E::::::::::::H:::::::AA:K:EV::::::D::::V::::::::I:::VS:
rrnAC0429       :E:::::D:H:E::S:::T:::::R:NE:CVQR:YAD:::::::::::::::::::::::
Hmu1105         :A::A::::::QRQ::::::::F:H::::DVE::HA::E::::::::::::::I:T::S:

consensus       AKQLPDDVTFRFVGDGDLREWLEEELAEEIEAGRVELTGWVDHDDVPRQLNDLRLLVLPS
#oth            .22..3221...1...2.1211131.111.21.41.21.....221.32.1312..11..
NP1922A         ::E::E::::::I:::::::E::::::A:::::K::F:::::::E:::::SE::::::::
HQ2691A         ::::::G:::::::::P:YD:::Q::S:::R::QI::::::::E:I:NE:SQM:::IM::
Hut1231         :::::G::R:::::::P:Y::VAS:::::::D:S:::A:::::G:::AE::RMK:::M::
rrnAC0429       :T:::::I::::::::::::::::D::AD::::H::::::::::K::HA::::E::I:::
Hmu1105         :RS::PEY::::::::G::P:::R::::::AD::::V::::::::::::::::E::::::

consensus       EPTEGLPTTILEALACGTPVYASPVSGVPDVVRDGETGFHIDSRDPAALADGIESILDRD
#oth            21......1....1......1.11...1...12311.112113222432233113.1313
NP1922A         ::::::::V::::M::::::L:T::::::::::Q:::S:LM:EVAGE:I:RD::G:::::
HQ2691A         :A:::::::::::M:::::::::A:::I:::IQT:Q::WL::ND::QSMS:E:VA:INST
Hut1231         ::::::::::::::::::::::::::::::::LE::::::::::::DV:RSAL::::L:E
rrnAC0429       Q:::::::::::::::::::::::::::::::::E::::T::::EST:::A:::R::::N
Hmu1105         D:::::::::::::::::::::T::::::::::::::::::AD::::T:R:::::::R::

consensus       DLAEISARGRELIEAEYSFDAACERYRGILRAVV-------
#oth            11432.432.22.341.1.21.23.1132.22222222111
NP1922A         ::T:L:QYA::H:K::::::::VR:W:RV:E:L-:::::::
HQ2691A         EIHIV:TKS::M:CKQ:::EQ:YN::ESL:SKI-:::::::
Hut1231         ::VD::D:::D::VE::R:E:::K:::AL:ES:::::::::
rrnAC0429       :::A::EN::T:::R::::::::::::::::S:AGYSS:::
Hmu1105         ::D:::::::T:::D::::A::::::::::::::DDRADRA