| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 3511 | NP6044A | NP0236A | HQ2232A | VNG6371 | pNG6143 | hla2137 |
| 1403 | NP6044A | 3501 | 1208 | 1315 | 1273 | 1384 | 1365 |
| 1825 | NP0236A | 1208 | 3388 | 1669 | 1678 | 1769 | 1781 |
| 3063 | HQ2232A | 1315 | 1669 | 3514 | 2726 | 2990 | 2935 |
| 3109 | VNG6371 | 1273 | 1678 | 2726 | 3380 | 2997 | 2988 |
| 3361 | pNG6143 | 1384 | 1769 | 2990 | 2997 | 3497 | 3237 |
| 3354 | hla2137 | 1365 | 1781 | 2935 | 2988 | 3237 | 3501 |
478 symbols consensus -MAILDDLSGFEFEDLMEDVFRNLGYENVRQAERTADEGRDIIMEEVVD-GTRRAIIVEC #oth 12331122212111231211..2.11.1.221311..1...11.2133311232.211.. NP6044A ::P:::EVD:::::EV:CS::::::::D:EKSRK:::K::::T:IDSASR:KDE:VV::: NP0236A MTTL::::::Y::::AVASL::A:D::D:SV:T:V:::::::T:YD---:-GET:YV::: HQ2232A ::::::::::::::::::::::::::::::::A::::::::::::::IN:::H::::I:: VNG6371 :---------------::::::T::::::::::K:::::::V::::::::::::::V::: pNG6143 :::V:::::::::::::::::::::::::::::::::::::V::::I::::::::::::: hla2137 :::V:::::::::::V:::::::::F:::::::::::::::V:::::::::::::::::: consensus KHTGTVGRPVVQKLHSAIATFDFDGPKRGMVVTTGRFTNPAEEYADRLQQNDDPHPIELL #oth ...2..1.......1..11.111....1..11.1..1.2..21..43123331121..12 NP6044A :::D::::::::::D::VS:YSH:::::::IA::::L::::I:::EQVG-------::IF NP0236A :::D::S::::::::::V::YSH::::H:::::S::::G:::K::KE:RERG:::::::: HQ2232A :::A:::::::::::::::::::::::::::::::::::::::::GD:::S:::Y::::I VNG6371 ::::::::::::::::::::::::::::::::::::::S::Q:::::::::N:::::::: pNG6143 :::::::::::::::::::::::::::::::A:::::::::::::::::R::::Y::::I hla2137 :::::::::::::::::::::::::::::::::::::::::Q:::N:::::::::::::: consensus DGEDLREIADEIGLDLYNGRIEILCDETLRPYDPAADVDAPVQEAFRDIENIE---AADL #oth ..321..21121.1..1...1..11221.2121.13132122212132.31231123221 NP6044A ::QRI::V:::V:M::::::V::IT:SV:H:PR:----QHVLD:FYAV:DR:KYLSRDEV NP0236A ::T:I::LGESV:M::R::::::::E:::PVG::----EHVLAAV:EE:K:AP::PRTK: HQ2232A :::G::::::D::::::::::::::Q:::::::::V:I:::::::::::N::N:::T:EV VNG6371 :::::::::::::::::::::::::::::::::::T:L:::I::::H::::::::::::: pNG6143 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2137 ::K:::::::::::::::::::::::D:::::::::::::A:A::::::::T::::S::: consensus PTPHSQVTFRPVVAITADTNAVFETSVGVIHRINDRTQFVVHAERGHPKVADDDVATLVT #oth .312231222.1122213.121.1.11....2.12312212212223132222313.112 NP6044A :D:LTTISLH::I:ADTK::R::::GA::::T:DETDNI::DGMSSELDGLT::LD:I:S NP0236A :E:AVE:GYN:I:D:E:V:RST:::GA:::::::R:DRLI:E:DPAG:RL:PGG:S::TG HQ2232A :::::::S:::::T:::N:::::K:::::::Q:::S::::I:::::::::V::::G:::: VNG6371 :::::A::::::::V::::::::::::::::::::Q:R::A:::::Q:Q:V:EN:::::: pNG6143 :V::::::::::::::::::S::::::::::::::::::::::::::::::::E:::::: hla2137 :VA:::::::::::V::::::::::::::::::::::::::::::::::::::::::::: consensus E-NFHATV-PLDTGQFTEVFDDVEERRFGQTQTEYKEWAVDRLQDYHTTTVTYTGDNNVT #oth 2122222.131142132232131222...2.221212.22221312111..2......1. NP6044A AYDLDTD:KVI:EAEY:Q:A:RIDR::::G:DQ:FRR:IKQQER:RL:E::S::::::Q: NP0236A I:---ES::A:SDE:KRHGGEA:---:::L:ES:ARD:TRE::C:RLE:::A:::::::: HQ2232A :::::::::T::I:E:::S::::::H:::::::::::::::H:K:::::::::::::::: VNG6371 :::L:::::V::SE:LG:I::E:::::::::::G::::T:E:::QH:::::::::::::: pNG6143 :::::::::::::::::::::::D:::::::::::::::::::::::::::::::::::: hla2137 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus YNKTCEPNLSDISVQSIEPVYLPRIRQTTELQEYTYPYEYYAAGPSRVTAEDGIHRCVHC #oth .211.2.121.1221221.2111311232214211122112.11222123211.22.121 NP6044A :S:E:A:S:D:VTIRLLR:F:VC::DASMK:NKR::ALDWF:TADDSWVVDNT:ET:RFA NP0236A :EQ::R:SPD:VAL:QV::C::::VDAAV::GA::HR:::D:::ERH:PRT:::R::::: HQ2232A ::::::::R::::::::::::::V:::::::R::S::H:::::::::::L:::::::::: VNG6371 ::::::::::::::::::::F::EV::M::I::::::::::::::::::::::::Q::Y: pNG6143 :::::::::::::::::::::::EV:::::IL::S::::::::::::::L:::::::::: hla2137 :::::::::::::::::::::::D::H::D:::::::::::::::::::::::::::::: consensus DTS----------------GVDE-TYTYCPNCGAIACSTHIKTERLEGEPVCTGCAVTER #oth 113111111111111111112122..11.21.12.21421211111121.1.11....21 NP6044A EEGRGSIDSVPAAATALKEAIGDP::AF::L:ET:VAERYMRHDGVT:::::VE::::D: NP0236A E:A:::::::::::::::::A:AA:::::E:::S:S:G::T::::::S::::::::::GE HQ2232A ::T::::::::::::::::::::::::::::::::::NR::::::::EK::::::::::: VNG6371 ::::::::::::::::::::::::::::::::::::::::::::::::::I::::::::: pNG6143 E::::::::::::::::::::::::::::::::::::D:::::::::::::::::::::: hla2137 ::::::::::::::::::::I::::::::S::::::::S:T:::::::::::::::::D: consensus FALKTKYFYDEENLEAFREEYADMPLHEKAMENKWLAGGSVVATLLLVVGLLVIGGII #oth .2222.1.21321142122.11212322.211.231212121221.212112221122 NP6044A :VGAK:H:RSDDTRQQYED:V:AKGTV::LSV::--T:VIT:LAV:::FA::FL---- NP0236A :FYA::::F::::RA:::D::EA::I:H:::::PY:TAAI:A:A::V:AAVA:A--AL HQ2232A :::Q::::::T:::NT::::::::AFYQ:::::T::V:A:A:TI::FI:::FI::::L VNG6371 ::::::::::GQ:::::::::::::::::T:::::::::::::::::::::::::::: pNG6143 ::::R:::::::::D:::K:::E:::::::::::L::::::::::::::::::::::: hla2137 :::::::::::::::::S::::::::::::::::::::::::::V:::::::::::::