| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||
|---|---|---|---|---|---|---|
| Consensus score | 3256 | hla1854 | NP4228A | HVO_1709 | rrnAC2626 | HQ2210A |
| 2579 | hla1854 | 3342 | 2757 | 1722 | 2097 | 2185 |
| 2477 | NP4228A | 2757 | 3408 | 1625 | 2086 | 2075 |
| 2127 | HVO_1709 | 1722 | 1625 | 2500 | 1944 | 1956 |
| 2643 | rrnAC2626 | 2097 | 2086 | 1944 | 3311 | 2577 |
| 2748 | HQ2210A | 2185 | 2075 | 1956 | 2577 | 3287 |
453 symbols consensus -MAPIDLL--KYRNLLLATAGFNLGFLIWFSFAPFTGPIAEEFGLSVAEIGILASAAIWA #oth 134322221111121221132112212111111121132131111132321221121123 hla1854 :VK:T:::YG:::::I::::M:::::V::::::::::G:::::::::QQL:VV:::::V: NP4228A :::IT:::YG::::::M:::M:::::V:::::::Y::E::T:::::::DL::V:::::V: HVO_1709 :-------::-------------------------------------------------- rrnAC2626 ::GL:KMT:::::T:::::I:::FS:::::::::::::M:::::::T::::::::S:::M HQ2210A MNS::KMT:::::T:::::V:::FS:::::::::::::M:D:::::L::::V:::::::L consensus APLGRILIGPLSDRFGAPVIGAITLAYVGVFAIISAFAQTYAVFFVSRLIVATAGITFVI #oth 212112221212121113322322133113122311123314..133.111111...... hla1854 V:::::V::::T:::::N:T:GV::VV::T:::::::S:::E::TA::IVASLS:::::: NP4228A V:::::V::::T:::::H:T:SV::IT::I::V:::::T:::::TG::I:ASLS:::::: HVO_1709 ------------------------------------------::::E::::::::::::: rrnAC2626 ::F::M:T:W:::K::::A:F::V:::::::S:G:::::D:S::::L::::::::::::: HQ2210A ::F::::T:W::::::::T:F::V:::::::S:W::::ES:T:::IT::::::::::::: consensus GIQHVAEWFEEENLGTAEGIYAGIGNAGAAGGA-LILPRVFGEGWSGPIF-------SSN #oth .....1...1111..2....1..1.....11..111...1.131131.1.122111122. hla1854 ::::::::::::::::::::F::::::::GL::YFT:::I::::YVD:::GSAFLAT::: NP4228A ::::::::::::::::::::F::::::::GL::YFT:::I::::YID:::GPEFLAT:A: HVO_1709 :::::S:::::::::M:::::::V::::::::::::::::::AD::::L::::::::Q:: rrnAC2626 :::::::::::::::L:::::::V::::::::::::::::::S::N::L:::::::::T: HQ2210A :::::S:::DASE::::::::::::::::::::::::::::SP::::::::::::::NT: consensus WRAAFFYTGIVSILLAIAYYVLGEAAKSEAKRQATKANASLKQWRFTATRYGTVVLALAY #oth .........32111.121..1112..11221.3..13222222.4111....1.1.12.. hla1854 :::::::::ALAV::GVV:::F:A::::::::E::::GV:WE::::I:::::A:::SV:: NP4228A :::::::::LIA:V:G::::::CD::::::::N::::GV:WD::K:IV::::A:::SV:: HVO_1709 :::::::::V::::::::::::::::S:KER::::AD::T::::VH::::::::A::::: rrnAC2626 ::::::::::::::::::::T::::::T::::::::E:TNF:G:LH:::::::::::A:: HQ2210A :::::::::::::V::GV::TF::::::SQ::A:::SK::::E:I::::::::::::::: consensus VMSFGLELSMNGWLATYYREAFNQDNLVIASTFAATFSIAAGLLRPIGGYVSDLLARKER #oth 1.1.....1.....1.....1.11211.1.11......1.......3...2..111.1.2 hla1854 ::::::::A:::::G:::::::G:GDI:::AS::::::V::::::::::::::VV::N:: NP4228A I:T:::::A:::::G:::::::G:GDI:::A:::::::::::::::L:::I:::VK:::M HVO_1709 :::::::::::::::::::::::T::::L::::::::::::::::::::::::V:::::M rrnAC2626 I:::::::::::::::::::::::::::::::::::::::::::::F:::G::::::::K HQ2210A ::T:::::::::::::::::G::TQ:::L:::::::::V:::::::V::::::::::::: consensus NILPFFEGRYREQWTFVALCFVVLSMFGMTLAGLTGNILVAVVAGFLVGMGCAFSEGAIF #oth 111.2.3.2..1.1..23.211113.12..1...1.3213..211.2..21..11..... hla1854 D:::V:::E::N::::A::S::::::::::::::::::Y::::::::::T:::::::::: NP4228A :L::W:H:E::N:::::T:VY:M:T:::::A:::::::YL::::A:F::L:::::::::: HVO_1709 D:::V::::::::S:::::S:I:V::LV::::::S:TV::::A:::M:::A:::A::::: rrnAC2626 :L::::K:Q:::::::LG:::I:VM::A::::::S:VL:N:::I:::::T:::WA::::: HQ2210A ::I:::T::::::::::S::::::A:::::::::::QV:I::S::::::::::::::::: consensus AQVPAMFPDNSGSVAGVVGGVGTVGGIVYPLAYSAALLPNLHVGYAIVAASMIPIVLLSA #oth ....1...12..1...1...1..1..11..1211223.11..3..221111.1..22.3. hla1854 ::::::::::::::::I:::I:::::V:::::F:::F:::::::::::G::::::LG:V: NP4228A ::::S:::::::::::I:::I:::::V:::I:F:H:M::S::W::TV:G::::::IA::: HVO_1709 ::::::::NS::A::::::::::I:::T:::V::SV::::::::::L:::T:V:::::N: rrnAC2626 ::::::::ND:::::::::::::::::::::F:::PW:A:::L::SVA:VT::::::::: HQ2210A :::::::::S::A::::::::::::::::::V:A:P::::::T::S:::V::::::::A: consensus WVFQPHIAERANDDGFV--GSRDSG---GPADD #oth ..11.31111.122.2212233423122333.. hla1854 :::::K:::::::::WFVS:E:IVA:::TGD:: NP4228A :::::::S:V::TS:W:VPDDLM:KTKGS:S:: HVO_1709 ::YR::::K::TV:::L::::SG:T:::::::: rrnAC2626 :::::E::KV::TA:::::::TQE:TTVASG:: HQ2210A :::::TV::::T:::L:::TG::::::::V:::