| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 2693 | HQ2019A | hla1098 | NP0102A | Hbo0469 | pNG5001 | rrnAC0252 |
| 1426 | HQ2019A | 2616 | 1080 | 1174 | 1184 | 1043 | 1019 |
| 1731 | hla1098 | 1080 | 3234 | 1665 | 1324 | 1132 | 1175 |
| 1819 | NP0102A | 1174 | 1665 | 2686 | 1402 | 1179 | 1192 |
| 1773 | Hbo0469 | 1184 | 1324 | 1402 | 2791 | 1388 | 1423 |
| 1904 | pNG5001 | 1043 | 1132 | 1179 | 1388 | 2654 | 2480 |
| 1941 | rrnAC0252 | 1019 | 1175 | 1192 | 1423 | 2480 | 2740 |
454 symbols consensus ---------------------------------------------------------GRF #oth 111111111111111111111111111111111111111111111111122222134313 HQ2019A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::--- hla1098 MTGGERGPPWDPGAEAEGGGESEGGGESEGGGESEGSGESEGGGESEGSGESEGRGS::L NP0102A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::MT:I Hbo0469 :::::::::::::::::::::::::::::::::::::::::::::::::VSLLERLYR:: pNG5001 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::--- rrnAC0252 :::::::::::::::::::::::::::::::::::::::::::::::::::::::MA::: consensus ------------PALLMARRNLSRNRLRSALAALGIVIGVVAIASLGMFGNALQYGATDA #oth 11111111111213352.21..2.213.22..2..131..2.112..21.22.2321223 HQ2019A ::::::::::::---ML:GQ::::Q:A:A:::::::::::F:VVT::TL:T:::VA::AE hla1098 REGVGGWFRGWR:VVS::A:::R:::V:TV::V::VC:::L:V:A::I:::V:AL::N:: NP0102A :::::::::::::S:FV:::::::::::::::::::LV:::::::::I:::V:AV::D:: Hbo0469 :::::::::::::::V::::::::::::::::::::I:::L:::::::::TT:RA::::Q pNG5001 ::::::::::::----::::::T:TKM::L::S:::::::::::::::::V::::SF:QN rrnAC0252 :::::::::::F::A:::::::T:TKM::L::S:::::::::::::::::V::::SF:QN consensus LGDIGNQVIISPNADEGIEELTERDVRAIRRAADP----DATVIPLRTRGGTVSYGRADA #oth 1.22.112312.1232232313321244.1.21331111311.2.131234421324331 HQ2019A ::GL::::::::SEESSN:A:NS::LQ::E:::AS::::RG:::::Q:T:T:A:N:E:QT hla1098 I::::T::VV:::::A:V:S:SAA::A:::::V:DPAVG::A::::YSDSAV:EGAGTQT NP0102A :::::T::::T::::A::SSIDDGT:TE:E:V:G-::::::A:V::::D::L:ER:S:T: Hbo0469 ::::::GIR:::::Q::Y:R::::::VD:::V::-::::EG::V:V:::HSEL:::DKKT pNG5001 ::NV:::LTVY::SG:NVT::::::I:T:::E:S:::::T:::S:VK::V:::::N:E:: rrnAC0252 ::NV:::LTVY::SG:N:T::::::I:S:::E:S:::::T:::S:VK::VEP:::N:E:: consensus AS-TIYGVENPAALYEADEGRLPERHRRGALVGADVAEELELHPGSQITVAGTSVRVIAV #oth 24111..222.23312.41113131213..21.132.2412244.2313122413.1211 HQ2019A :T:QV::TTT:KT:FN::DS-I::F::Q::I::::::SS:NVQQ:::VQ:GPN:Y::::I hla1098 FV::V::::E:GLAF::A:::::D::::::I:::GI::D::VSA:DTVGI::SQ:::V:: NP0102A :G:::::I:::::V:T:::::::::::Q::V::::L:ST:::RV:DS:D:::D:H::::: Hbo0469 V:::V::ID::GEM:::TD::A:G:LH::::::SR::DQ::IES:NR:::GNQ:F:::G: pNG5001 ::E::::::::::::::Q:::VSPF-:T:::I:S:::::HD:::::::::N:::::IR:: rrnAC0252 VRE:::::::::E::::K:::VSPF-:S:::::SN::::HD:::::::::N:::::IR:: consensus LEEGDGFSPINPDNAIILPESAFS----GRGYSQVVVQAESGAAANATADAIRDTLNDRE #oth .12434112431131122.341132111421.211214231133.213.3211441.2.1 HQ2019A ::AET:I:::QGNS:::::P:::T::::TS::::::IK:N::GD:T:I:TEV:SR::G:: hla1098 :A:SQT:::VA::::VF::::::A::::AD::A:AL:V:::::T:R:A:::::E:V:V:: NP0102A ::PVES:T::S::D:VM:::A:VGD::::D::E:::::T:T::::T:V:::VEL:V:::D Hbo0469 :::Q::::LL::NG:VMI:VKS::GYNY:S::::::::TP:SE:::E::V:V:QE::::: pNG5001 :::::A::SA::::R::M:VGS::::::E:S::E:YITEST:TR::E::MG:::S::::: rrnAC0252 :::::P::ST::::R::M:ATS::::::Q::::E:Y:IEST:TR::E::MG:::A::::: consensus ERVDVFELGSVVDEIEEFFQILNTFLAGIASISLVVAGVSILNVMLMSTVERREEIGVLR #oth 21.3111.312213.221.311131.21212...2...1..1.1...112...2....1. HQ2019A N::S::S:Q::LTQ:::::GL::G::LA:::::::::::::F:I:::TVS:::G:::::: hla1098 ::::L:::AA:::::ND::DL:S:::L:LGA::::::::::::::::::::::Q::::M: NP0102A ::::::::S::::::D:::SL:SV::I:LGG:::F:::::::::::::::::::::::M: Hbo0469 :K:T::::::IT:G:NQ::G:::A::I:VG:::::::::::::::::::I:::Q:::::: pNG5001 Q::S:Q::::L::T::QQ:::I::V:::::::::L:::I::::::::::::::::::::: rrnAC0252 :::F:Q::::L::T:::Q:::I::V:::::::::L:::I::::::::::::::::::::: consensus AVGVQRRDVLRVMLAEATLLGLAGGAAGVILSVG-VAGLAINTPAV-DAMAVFRPPNALY #oth ...231221112213.12.1.32.133.2423232121143223222333221313.331 HQ2019A :::IH:QQ:::TLII:S::::V:::FV:ACGG:IT:IAVGM::QL-:PIS:I:V:L:::I hla1098 ::::T:::::::L::::G:I:A::A:::TL:T:LL::::VAT:::::::AL:LD:T:GY: NP0102A ::::P::A:::T::F::A::::V:A:G::VITALL:V::YLA::V-:ELWV:LD:T:GV: Hbo0469 :::::KL::V:MI::::G::::V::FF:A::A:F:-:::IL:QVVISNPWLT:A:Q:L:: pNG5001 :::Y:K::I:K:::M::::::FL::IV::A:::::-::::::HY::G:::::::L::VW: rrnAC0252 :::Y:K::::K:::M::::::FL::V::::::L::-::::::HY::G:::::::L:::W: consensus VGAAFGFGVLTSIVSGLYPAWKAANERPVEALRG #oth 232124..1322221.1...1...3.2..11..2 HQ2019A :FIG:::::IVALIG:::::Y:::W:P:::S::: hla1098 LLL:LV:::GVG::::A::::::::::::::::S NP0102A LA:::A::::I:V::::::::::::::::::::S Hbo0469 I:L:V:::IV::VL::::::::::T::::::::K pNG5001 :::::T::::::::::::::::::S:E::D:::: rrnAC0252 :::::S::::::::::::::::::S:E::D::::