5 genomes BUD1892 5 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1966 - Hbo2861 - - hla0319 NP2650A HQ1721A

Pairwise sequence scores
Consensus score	963	HQ1721A	Hbo2861	rrnAC1966	hla0319	NP2650A
826	HQ1721A	971	760	783	580	599
796	Hbo2861	760	983	779	572	580
850	rrnAC1966	783	779	988	636	618
692	hla0319	580	572	636	961	725
707	NP2650A	599	580	618	725	972

128 symbols
consensus       M--ATILHTCLNVADAARAIAFY-EQFGFEESWQFTTEDGETTNYYVADDNGVELQLSET
#oth            13313...2.......222221.2211..12..2.1121.2.2.2..2.23...1..11.
HQ1721A         :SD::::::::::::::ES:::::::::::K:::::S::::::::::V:T::::::::::
Hbo2861         :PS::::::::::::::E::E:::K::::T:::::::P::R::::::S:GD:::::::::
rrnAC1966       :GN:S:::M:::::::TAS::::::::::::::::::P::::::::::::S::::::A::
hla0319         -::ME:::::::::::D:TADW:VD:L:::R::E:::A::D:R:V:::::A:::F:::D:
NP2650A         -::MA:::V:::::::D::VDW:T:NL::::::G:E::S:::V:R:::::::::::::D:

consensus       DGETPFEMGDGWDHLALGVDDVDATVEAIDHHGVVKEPGPQPEAGAYTAFIEDPDGHAVE
#oth            2..13111.211..1.11.1...2122211.1.122..11..1.1.1...13.....21.
HQ1721A         T:::T::::T:::::::::::::E:IKQV::Y:I:A::::::A:::::::::::::::::
Hbo2861         ::::D::::T:::::::::E:::Q:::R:N:Y::E:::::::::E::::::R:::::V::
rrnAC1966       ::::S::::S::::::::::::::::DR::::::::::::::::::::::VA:::::H::
hla0319         :::E:SDD::RY::V:V:::::::AF:::::::::::::D::::::R:::VK::::::::
NP2650A         E::::S:D::R:::::VS::::::A::::::::IQQ::SD::A:::R::::::::::VI:

consensus       LIEPLN--
#oth            ....1431
HQ1721A         ::::VSE:
Hbo2861         :::::D::
rrnAC1966       :::::ED:
hla0319         :::::-::
NP2650A         ::::::GE