|
Pairwise sequence scores | ||||||
---|---|---|---|---|---|---|
Consensus score | 3880 | NP6264A | HQ1451A | hla0974 | rrnAC0187 | Hmu2190 |
1375 | NP6264A | 2189 | 1138 | 1177 | 1112 | 1212 |
2950 | HQ1451A | 1138 | 4453 | 2618 | 1294 | 2363 |
3226 | hla0974 | 1177 | 2618 | 5444 | 1414 | 2668 |
1752 | rrnAC0187 | 1112 | 1294 | 1414 | 2416 | 1649 |
3177 | Hmu2190 | 1212 | 2363 | 2668 | 1649 | 4439 |
750 symbols consensus ----D--DREEAVREAVERSRSGAPAVGEVVRDRFSSDEVFQRIVAAADEEVTSGSRELF #oth 112223322222323223322212123132212...2..111.1112..1.212131.11 NP6264A ::::-::---------------MGNGNETIF:N:::T::IYE:V:VE::::MNRSMP::: HQ1451A ::::MADS:PT:QSQVDNETDD:I:KQ::::PE:::::::::::::D::H::::SV:::: hla0974 ::::-::-----M::V:::::::::::::A::::::::::::::I::::::::::::::: rrnAC0187 ::MA:NE:::::::D::DV:::::::G:S:I:::::A::I::::IV:::::::V:T::M: Hmu2190 MDEQ:PP:P::S::::::::::::::::R:::::::T::::::::::::::I:::::::Y consensus FSGLAAGFAITITFLLYASLTAATDGDPILSALLYPLGFIYIIIGGYQLYTENTLPPVAL #oth .111.1.1..11..1211.22131223111221......11..1.2.............. NP6264A ::A::G::::S::::::V:G:H:A::AA::G:I::::::::::::N:::::::::::::: HQ1451A ::A::::::::::::V:::MS:T:E-T:LVA::::::::::::::::::::::::::::: hla0974 :::::::L::::::M::::::::::SH::::V:::::::::::::::::::::::::::: rrnAC0187 :A:V:G:::::V::M:::::Y:K:G::::::::::::::VF::L:D:::::::::::::: Hmu2190 :::::::::::::::MLV::::S:G::::::T:::::::::::::::::::::::::::: consensus TLERLASIPALLRHWGIVLAGNFAGGGIGALALAYGGVFSADATAAAADIAQKGIETSQE #oth 11..11.2.21..3141..21.14..31..11.1311.12222232.4411221222334 NP6264A V:::I::L::M::MY::::W::L:::T::::V::H::::D:AT:QT:IE::TS:V::NWW HQ1451A :F:::S:V:T:::::S:::I:::L::::::::::::::::PE::SV:V:::::::S:PP: hla0974 :::::::::T:::::T:::::::I:::::::V:S:::::TG:TVD::RY:SEG:FSIGAV rrnAC0187 V::::::::S:::I:VV::IS:LF::ML::::::TTN:L::::A::::GF:::A:::::I Hmu2190 ::::I::V:::::N:IV::::::T::A:::M:::W:::L:::G::::FS::::::KA::G consensus PLFFKAAFAGLIVAGVVWVDFASRDSISRLAVVYIAFLAIPLGDLFHVVVSFTEMVYLVF #oth 3..2..21..1.......2211332221.3411.21.....2.2.1.1..12..231.22 NP6264A ::::::M:::::::::::M::SVSNAMA:VTLI:M::::::V:G:::I::AS::VMF::: HQ1451A Q:::::::::F:::::::L:::AQET::::F:::::::::::::::::::::::A:F:IA hla0974 :::::::M:::::::::::G:::T::V::ML:::L:::::::::::::::::::VL::F: rrnAC0187 T::S::V:::::::::::::YSL:::::::VLI::S:::::F:N:Y:::::A:::F:::: Hmu2190 E::V:::::::::::::::EY::::T:::I::::L::::::::G:Y:::::::::::::L consensus E-------GEIGLIVGAVQFVLPVLLGNTIGGILLVTVVNYFQTSERRLEEARFEGVNRQ #oth 411111111222142.422.11...1..12..11...2...11.1221114222313411 NP6264A L::::::::::::W::::::A::::::::L:::::::I:::::::D------KVH:FEG: HQ1451A H::::::::GV:V:A:FGG:::::::::::::V::::::::Y::::::::IDQ:TN:-:R hla0974 :YNIPLYGA::S:YS:I:G::I:::I:::::::V:::L:::::::QE::::::::::T:R rrnAC0187 I:::::::::LA:S::LW::::::::::SV::VV::::::::H:T:::::T::D::PK:: Hmu2190 V::::::::DL:VV::M:E::::::::::V::::::::::::::T:E:::S:::D:A::: consensus LSLREWILGGAA--GRSYVPAIDTLE-------G--RILVPI-NPRTEG-LVELA---AS #oth .232.1211342111111114313413333333231122111311112232211133312 NP6264A :P:K::V:TVNT::------------:::::::-::------:------:-----:::-- HQ1451A ::S::ML::NV:::::::::V:::::NFTRDPDSF::V::::A:::::TE:::::ARL:: hla0974 :TVP::V::R::::::::::IL:AT:ATLFANE:Y:::M:::T::::D:PI::::SQI:: rrnAC0187 :T:::::W::WSAS:::::::T:EV-:::::::-::------:-:::--:-----:::-- Hmu2190 ::W:::::::L:::::::::L:::S:RAAGHGA:SE::::::S::::::T:A:::CAY:A consensus --E-G-VH-VHVVQAP-RL-L--G-DR-D-I---SE--M-G-REIA--Y--D-ETSTIVS #oth 332323123112222232232332322323221212332323222233233232211211 NP6264A ::-:-:--:-------:--:-::-:--:-:-:::--::-:-:----::-::-:------- HQ1451A ARDN:R::V:::I::DKN:V:DHEH::R:E:TAQ::QLLD:IES:VDQRNASF:S::::: hla0974 DH:D:L::I:::::::E:MS:SA:AG:IADV:::::EG:A:L::T:EE:DI:VS:::V:: rrnAC0187 ::-:-:--:-------:--:-::-:--:-:-:::--::-:-:----::-::-:------- Hmu2190 GK:AAY:EF::I:RL:D::AGGY:G:QT:Q:VAE:DAQ:ERV::::SS:EV:S::::::: consensus HRSFEEVF--A-RTRPD-VVMGWGED-LWNAARAERPIDELTN-LPCDFLILNDRGLDPE #oth 211211213313122213121112123112221111121111231121112222222132 NP6264A --------::-:-----:--------:----------------:---------------- HQ1451A P:::::I:DF:A:::::M:::::::EK:::S::::::::::::R:::::::A::::::CS hla0974 ::::::::NM:R:::::A:L::::::Q::::::::::::::::Q:::::::::ESD::TS rrnAC0187 --------::-:-----:--------:----------------:-------------::: Hmu2190 :::I::::QL:D:KGA:T:::::D::A::K:G:::::L::::SS::A:::V:A:::F::: consensus -VLLPT-GGPDS-L-AEVASAL--T--S--SLL-VVDGP--RTEGE-FL--WA--NDLSD #oth 321212312222313212122133133233111312221331222131133113322222 NP6264A :-----:-----:-:-------::-::-::---:-----::-----:--::--::----- HQ1451A D:::::V::::AA:A::T:H::QE:GK:TL:::T:::N:DE:AA::Q::DD::ETH:I:: hla0974 R:::::S:::::T:G:::::V:SR:ADAEV:::H::N::EN:::::G::TA::AE:G::: rrnAC0187 :-----:-----:-:-------::-::-::---:-----::-----:--::--::----- Hmu2190 EI:I:VA:NEH:V:SG::::::GQ:VG:AI:::R:A:::GR:::N:D::AR::KN:::ES consensus AERIVDDSGDVEAAI-REA-E-TLVIIGATEDGLLSRL-SNSLHLDV--DVDCSVLLAER #oth 12111122122121131213232222211123211222312111221332112112111. NP6264A --------:SI::--:---:-:---------:A::AE::--------::---------:: HQ1451A ::::::VT:::::::E:::K:S:M:ML::::Q::::::L:::::MQ:VNK::A::V:::: hla0974 ::::::::::::G::A:::ADN:::::::::K::::::V::::::::IH::::::::::: rrnAC0187 ---------------:---:-:----------------:--------::---------S: Hmu2190 :D::::::::::G::V:A:P:HG:I:::::R::::::IG:D::::::LS::::::::::: consensus PNERSL-QRLFG------------------------------------------------ #oth 342121321121311122111111111111111111111111111111111111111111 NP6264A RIDH--:-----:::::::::::::::::::::::::::::::::::::::::::::::: HQ1451A :H::::T:::I:SGRRDQ:::::::::::::::::::::::::::::::::::::::::: hla0974 :SN:::RD::::PGRRVSGPPDGGVERDPDEASGAKIGDSGRRRDEESDDLASGDDDGTD rrnAC0187 E:::--:-----:::::::::::::::::::::::::::::::::::::::::::::::: Hmu2190 AT::G:L:::::N::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 NP6264A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1451A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0974 DAGDVSNDGNAGDNGNGDDSDEGDEAADRSVITDHDDPEEEDDEGEADDSLSREPAVITD rrnAC0187 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2190 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------ #oth 111111111111111111111111111111 NP6264A :::::::::::::::::::::::::::::: HQ1451A :::::::::::::::::::::::::::::: hla0974 HDEPDEEEEDSEEADDEGDESETDDETRSA rrnAC0187 :::::::::::::::::::::::::::::: Hmu2190 ::::::::::::::::::::::::::::::