|
Pairwise sequence scores | ||||||
---|---|---|---|---|---|---|
Consensus score | 3146 | hla1326 | NP3798A | HQ1487A | VNG0157 | Hut2602 |
2382 | hla1326 | 3406 | 2599 | 1813 | 1769 | 1795 |
2441 | NP3798A | 2599 | 3191 | 1854 | 1787 | 1847 |
2382 | HQ1487A | 1813 | 1854 | 3321 | 1975 | 2077 |
2380 | VNG0157 | 1769 | 1787 | 1975 | 3109 | 2492 |
2465 | Hut2602 | 1795 | 1847 | 2077 | 2492 | 3133 |
467 symbols consensus MAD--------------------------IDYAARARDALGFSRWWLILAAAAMMAAVSP #oth .42321111111111111111111111112.1.2..124.......1211..21..2.1. hla1326 :::DGDGATDPDDASESDDSGVDDGADDGV:::G::AEI:::::::Q:V:::G::::::: NP3798A :G:SSD:::::::::::::::::::::::::::G:::E::::::::Q:V::::::::::: HQ1487A :Q-::::::::::::::::::::::::::::::S::::Q::::::::L:G::VS::L::: VNG0157 :P:::::::::::::::::::::::::::A:H:::::AH::::::::V::::::::V:G: Hut2602 :NEE:::::::::::::::::::::::::V:H::::::V::::::::V::::::::V:G: consensus YQYVWSSIEGPLAESLGIALPALGAVFTLFVVFQAGSQFPVGWWRDRRGPRALSFAAAIL #oth .......113.1.23112331..11..111.11.11..1.1.1...21..112314..2. hla1326 :::::::::Q::::::DL:::::::::SFY::::SL::::A:K:::S:::G::T:L::L: NP3798A ::::::::::::::::D::::::::::SFY::::SL::L:A::::::::::::M:F::L: HQ1487A :::::::::::::TQF:AQP:::::::::::I::::::::::::::K:::::I::I:::: VNG0157 :::::::LRE:V:RH:::EAA::ST:::::::V::::::::::::::H:::GVAVV::F: Hut2602 :::::::LRD:V:TN:::DSA::ST:::::::V::::::::::::::H::::V:V::::: consensus AGGGYIGLAYATTVWQLYLLYSLGAIGVGIVYTVAVNTALKWFPDRRGLTTGVGTMAFAG #oth .....2..11.223.11.21.1...2...1....1....1......2...1.2......1 hla1326 :::::V:::::::L:::::::::::::::::::::::::V::::::T::::::::::::: NP3798A ::::::::::::S:::::V::::::V:::::::::::::V::::::T:::::I::::::: HQ1487A ::::::::::::AI::I:I::::::::::V::::S:::::::::::P::::::::::::A VNG0157 :::::L::SV:R:::::::A:A:::L::::::::::::::::::::::::A:A::::::A Hut2602 :::::L::SV:E:T:EI::A:::::L::::::::::::::::::::::::A::::::::: consensus GSALVVPYVRAN----ATAAAYVDVLRNVGVVILLVVLVGALLLRDPPDGWLGL----D- #oth ...11..1....112211122.32..121.131221312..22.....21.222333322 hla1326 ::::::::::::::::::::::G::::::::A::V:T::::Y:::::::D::::EEDG:G NP3798A ::::::::::::::::::V:G:A:::::::L:::::L::::V::::::ED::::DDRA:: HQ1487A :::::::F:::::::::::TS:PF:::TL::I:G:GIFL:::I::::::::TDSRTTTTE VNG0157 :::AL:::::::TGPALP:D:::G:::TL::LVFV:::G:::V:::::A::---::::-: Hut2602 :::AL:::::::TGAG:PVT:::G::QQ:::::FA:::::::V:::::E:::--::::-: consensus ----DRSDGLAASLTGR---QYTWREMLRTWQFWLMYAMFVAVSGAGLMLTAKVVSFADA #oth 222213212331331.2111112121222.1...11.21.1.21..1.211111.12.22 hla1326 AEGG::::N:::::R:::::A::T::::S::::::L::::::MA::D:IVI:N::R::EQ NP3798A :::::ND:::::::R:::::A::TG::::::::::L::::::TA::D:L:I:N::RM:E: HQ1487A ENQS:KT:TEMTNV::TNET::R:HDV:::::::V::G::I::::::::::::::::::: VNG0157 ::::-::A:DT:AH::P::::FS:::LIH::::::::VV::::::::::::E::::Y:AH Hut2602 ::::--:::SVTD-::P::::F:::::V::R::::::::::::::::::::E:I::Y::H consensus LGLAAVIATAAATLLPLAGGVGRLVLGEVSDRVDRTHAMAASFTLAGVGLLAVAYFGVAG #oth 1..1112...1.....2.1.21.111.32...11.331..22.112.3112.12311232 hla1326 F:::::V:::S:::::V:A::S:MI:::A:::F::KKV:::::V::::FR::LIGA:R:E NP3798A ::::::V:::::::::I:A::S:::::A::::F::V:V::V::V:::AFR::LVPA:::D HQ1487A :::T::T:::S:::::V:::A:::I::DL::::P:E::::V::::C:I::A::V::AQN: VNG0157 ::::GG:::::::::::::::::::V:G::::::::T::::T::AV::::F:::F:::R: Hut2602 ::::G:::::::::::::::I:::::::::::::::N:::GA:::C:L::F:::::::S: consensus AGVAFVAAVVAATFFWSPQYTLFPSVVGDYYGEQHSSANYALLYSGKVWGGVFGGTVTGA #oth 3131.112.2311..1..1111..11111...231..2...2..11.21....1.111.2 hla1326 :::::::L:M::M::S::LFVY::::IA::::S:N::G:::V::TA::G::::A:::::Y NP3798A ::I::::F:LG:M::S::L:VY::AM:A::::AE:::S:::A::TA::G::::A:::A:: HQ1487A STLG:L::::MT::::::::::::::I:T:::SAN::::::::::::M:::::::AAA:W VNG0157 D::G::V::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2602 M:S:::V:::V::::::::F:::::::::::::K:::::::::::::I:::::::::::: consensus LVAAVGWTETFLLGGGLAVAAGLAALLLRPPSGPGLEA--DD--AG- #oth 11333..321121.13..12..3.1.2.21.3333324113233221 hla1326 :::TA::IP::A::::::I::::::::::::::S:::::::ATA:AD NP3798A ::::F::VP:LT:::A:::::::::::::::TDA:::R::::AT::: HQ1487A :INQ:::SIA::V:S::::I::I:::A::::ET:AT:HIDA:IDT:D VNG0157 ::GSL::::::::::V::::::G:T:::S::D:-----::--::--: Hut2602 A:V::::::::::::T:::L::V:::G:DA::P:DADK::R-::--: